Variant report

Variant	rs7538609
Chromosome Location	chr1:92887137-92887138
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs35258161	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs56871729	0.86[AFR][1000 genomes]
rs56950188	0.86[AFR][1000 genomes]
rs59302389	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs59912348	1.00[AMR][1000 genomes]
rs61638989	1.00[AMR][1000 genomes]
rs72958741	1.00[AMR][1000 genomes]
rs72958751	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs72958758	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs72958762	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs72958788	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs72960803	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs72960828	0.93[AFR][1000 genomes]
rs72960867	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7531207	1.00[AMR][1000 genomes]

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:92885600-92890000	Weak transcription	H9 Cell Line	embryonic stem cell
2	chr1:92885600-92890000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
3	chr1:92885600-92891000	Weak transcription	H1 Cell Line	embryonic stem cell
4	chr1:92885800-92890000	Weak transcription	iPS-15b Cell Line	embryonic stem cell
5	chr1:92885800-92890200	Weak transcription	HUES64 Cell Line	embryonic stem cell
6	chr1:92885800-92890400	Weak transcription	iPS-20b Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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