The 2.0 version of rSNPBase

Variant report

Variant rs7539547
Chromosome Location chr1:62474737-62474738
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:38 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:62385000-62494200 Weak transcription Aorta Aorta
2 chr1:62409200-62518600 Weak transcription Pancreas Pancrea
3 chr1:62424200-62494200 Weak transcription Esophagus oesophagus
4 chr1:62444200-62479200 Weak transcription Fetal Intestine Small intestine
5 chr1:62446600-62487600 Weak transcription HUES64 Cell Line embryonic stem cell
6 chr1:62447400-62481200 Weak transcription Lung lung
7 chr1:62456200-62478600 Weak transcription Stomach Smooth Muscle stomach
8 chr1:62458800-62521400 Weak transcription Primary T regulatory cells fromperipheralblood blood
9 chr1:62459000-62484000 Weak transcription Duodenum Mucosa Duodenum
10 chr1:62459000-62516000 Weak transcription Rectal Mucosa Donor 29 rectum
11 chr1:62459000-62530600 Weak transcription Primary T helper cells PMA-I stimulated --
12 chr1:62459200-62487800 Weak transcription HUES48 Cell Line embryonic stem cell
13 chr1:62459200-62511200 Weak transcription Gastric stomach
14 chr1:62459200-62550000 Weak transcription Primary T cells fromperipheralblood blood
15 chr1:62459400-62479000 Weak transcription Left Ventricle heart
16 chr1:62459400-62484000 Weak transcription Liver Liver
17 chr1:62459400-62493800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
18 chr1:62459600-62478600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
19 chr1:62459600-62483600 Weak transcription Rectal Mucosa Donor 31 rectum
20 chr1:62459600-62494200 Weak transcription Sigmoid Colon Sigmoid Colon
21 chr1:62459800-62483600 Weak transcription NHEK skin
22 chr1:62460000-62478600 Weak transcription Primary T helper cells fromperipheralblood blood
23 chr1:62460000-62499600 Weak transcription Fetal Intestine Large intestine
24 chr1:62460000-62516400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
25 chr1:62460000-62544600 Weak transcription Primary T helper naive cells fromperipheralblood blood
26 chr1:62460200-62487600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
27 chr1:62460200-62516000 Weak transcription HMEC breast
28 chr1:62461800-62479000 Weak transcription Psoas Muscle Psoas
29 chr1:62466400-62494200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
30 chr1:62466800-62477000 Weak transcription Fetal Brain Female brain
31 chr1:62469000-62533600 Weak transcription Rectal Smooth Muscle rectum
32 chr1:62469800-62488000 Weak transcription H1 Cell Line embryonic stem cell
33 chr1:62473000-62488200 Weak transcription H9 Cell Line embryonic stem cell
34 chr1:62473800-62487000 Weak transcription HUES6 Cell Line embryonic stem cell
35 chr1:62474000-62475200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
36 chr1:62474000-62479000 Weak transcription Breast Myoepithelial Primary Cells Breast
37 chr1:62474200-62478600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
38 chr1:62474200-62518600 Weak transcription Primary T cells from cord blood blood

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Last update: Aug 31, 2015