The 2.0 version of rSNPBase

Variant report

Variant rs7539915
Chromosome Location chr1:172582786-172582787
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:57 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:172559000-172583400 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr1:172566600-172595800 Weak transcription Primary T helper naive cells from peripheral blood blood
3 chr1:172570600-172584000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
4 chr1:172570600-172585400 Weak transcription Aorta Aorta
5 chr1:172576800-172585400 Weak transcription Pancreatic Islets Pancreatic Islet
6 chr1:172579400-172585400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
7 chr1:172579600-172585200 Weak transcription ES-I3 Cell Line embryonic stem cell
8 chr1:172579800-172588600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
9 chr1:172580000-172583000 Weak transcription GM12878-XiMat blood
10 chr1:172580000-172583800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
11 chr1:172580000-172584200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
12 chr1:172580000-172584400 Weak transcription HSMMtube muscle
13 chr1:172580000-172585400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
14 chr1:172580200-172585000 Weak transcription Duodenum Mucosa Duodenum
15 chr1:172580200-172589800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
16 chr1:172580400-172582800 Weak transcription H1 Cell Line embryonic stem cell
17 chr1:172580400-172584000 Weak transcription Dnd41 blood
18 chr1:172580600-172583000 Weak transcription Liver Liver
19 chr1:172580600-172583000 Weak transcription HepG2 liver
20 chr1:172580600-172583600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
21 chr1:172580600-172585400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
22 chr1:172580800-172583200 Weak transcription Fetal Thymus thymus
23 chr1:172580800-172583600 Weak transcription Primary hematopoietic stem cells short term culture blood
24 chr1:172580800-172583600 Weak transcription Adipose Nuclei Adipose
25 chr1:172580800-172583800 Weak transcription HUES48 Cell Line embryonic stem cell
26 chr1:172580800-172583800 Weak transcription HUES6 Cell Line embryonic stem cell
27 chr1:172580800-172585000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
28 chr1:172580800-172585400 Weak transcription Placenta Placenta
29 chr1:172580800-172588800 Weak transcription NH-A brain
30 chr1:172581000-172582800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
31 chr1:172581000-172583400 Weak transcription HUES64 Cell Line embryonic stem cell
32 chr1:172581000-172583600 Weak transcription Primary hematopoietic stem cells blood
33 chr1:172581000-172583800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
34 chr1:172581000-172583800 Weak transcription Breast Myoepithelial Primary Cells Breast
35 chr1:172581000-172584000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
36 chr1:172581000-172584400 Weak transcription iPS-20b Cell Line embryonic stem cell
37 chr1:172581000-172585200 Weak transcription Primary neutrophils fromperipheralblood blood
38 chr1:172581000-172585200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
39 chr1:172581000-172585600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
40 chr1:172581000-172585800 Weak transcription Placenta Amnion Placenta Amnion
41 chr1:172581000-172586400 Weak transcription Primary T cells from cord blood blood
42 chr1:172581000-172589400 Weak transcription Primary T cells fromperipheralblood blood
43 chr1:172581200-172582800 Weak transcription Rectal Mucosa Donor 31 rectum
44 chr1:172581200-172583200 Weak transcription Skeletal Muscle Female skeletal muscle
45 chr1:172581200-172584000 Weak transcription iPS-18 Cell Line embryonic stem cell
46 chr1:172581200-172584000 Weak transcription Primary B cells from cord blood blood
47 chr1:172581200-172584000 Weak transcription Primary T regulatory cells fromperipheralblood blood
48 chr1:172581200-172584400 Weak transcription Primary T helper cells PMA-I stimulated --
49 chr1:172581200-172584400 Weak transcription Primary T helper cells fromperipheralblood blood
50 chr1:172581200-172584600 Weak transcription Primary monocytes fromperipheralblood blood

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Last update: Aug 31, 2015