The 2.0 version of rSNPBase

Variant report

Variant rs7543653
Chromosome Location chr1:113676486-113676487
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:102 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:113663400-113683400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr1:113667200-113678400 Weak transcription Pancreas Pancrea
3 chr1:113667200-113682400 Weak transcription Fetal Brain Male brain
4 chr1:113667200-113683400 Weak transcription Esophagus oesophagus
5 chr1:113667200-113683400 Weak transcription Skeletal Muscle Male skeletal muscle
6 chr1:113667200-113683400 Weak transcription A549 lung
7 chr1:113667400-113679000 Weak transcription Colon Smooth Muscle Colon
8 chr1:113667400-113685200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
9 chr1:113667600-113683600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
10 chr1:113667800-113683400 Weak transcription Gastric stomach
11 chr1:113667800-113683600 Weak transcription Placenta Amnion Placenta Amnion
12 chr1:113668200-113683200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
13 chr1:113668200-113683600 Weak transcription Small Intestine intestine
14 chr1:113669600-113676600 Weak transcription Primary T helper naive cells from peripheral blood blood
15 chr1:113669600-113679000 Weak transcription Stomach Smooth Muscle stomach
16 chr1:113669600-113679800 Weak transcription K562 blood
17 chr1:113669600-113680000 Weak transcription Fetal Intestine Large intestine
18 chr1:113669600-113683000 Weak transcription Stomach Mucosa stomach
19 chr1:113669600-113683400 Weak transcription Brain Angular Gyrus brain
20 chr1:113669600-113683400 Weak transcription Brain Inferior Temporal Lobe brain
21 chr1:113669600-113683400 Weak transcription Fetal Lung lung
22 chr1:113669600-113683400 Weak transcription Fetal Muscle Leg muscle
23 chr1:113669600-113683400 Weak transcription Lung lung
24 chr1:113669600-113683400 Weak transcription NHEK skin
25 chr1:113669600-113683600 Weak transcription Sigmoid Colon Sigmoid Colon
26 chr1:113669600-113685400 Weak transcription Primary T helper naive cells fromperipheralblood blood
27 chr1:113669600-113689400 Weak transcription Thymus Thymus
28 chr1:113669800-113677200 Weak transcription Brain Hippocampus Middle brain
29 chr1:113669800-113679000 Weak transcription Rectal Smooth Muscle rectum
30 chr1:113669800-113679400 Weak transcription Duodenum Smooth Muscle Duodenum
31 chr1:113669800-113683000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
32 chr1:113669800-113683000 Weak transcription Rectal Mucosa Donor 29 rectum
33 chr1:113669800-113683400 Weak transcription Primary hematopoietic stem cells blood
34 chr1:113669800-113683400 Weak transcription Muscle Satellite Cultured Cells --
35 chr1:113669800-113683400 Weak transcription Hela-S3 cervix
36 chr1:113669800-113683400 Weak transcription NH-A brain
37 chr1:113669800-113683600 Weak transcription H9 Cell Line embryonic stem cell
38 chr1:113669800-113683800 Weak transcription Fetal Kidney kidney
39 chr1:113669800-113683800 Weak transcription HSMMtube muscle
40 chr1:113669800-113685000 Weak transcription Primary T helper cells PMA-I stimulated --
41 chr1:113669800-113685000 Weak transcription Primary T helper cells fromperipheralblood blood
42 chr1:113669800-113690000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
43 chr1:113670000-113676600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
44 chr1:113670000-113683400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
45 chr1:113670000-113683400 Weak transcription Skeletal Muscle Female skeletal muscle
46 chr1:113670000-113685400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
47 chr1:113670200-113683400 Weak transcription NHLF lung
48 chr1:113671200-113680000 Weak transcription Primary T regulatory cells fromperipheralblood blood
49 chr1:113671200-113683000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
50 chr1:113671200-113683000 Weak transcription Cortex derived primary cultured neurospheres brain

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Last update: Aug 31, 2015