The 2.0 version of rSNPBase

Variant report

Variant rs7548188
Chromosome Location chr1:184445692-184445693
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:62 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:184427400-184448400 Weak transcription Fetal Muscle Leg muscle
2 chr1:184429000-184454800 Weak transcription Aorta Aorta
3 chr1:184429400-184449600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr1:184430600-184449800 Weak transcription Right Ventricle heart
5 chr1:184430600-184450000 Weak transcription Fetal Stomach stomach
6 chr1:184431400-184446400 Weak transcription Fetal Adrenal Gland Adrenal Gland
7 chr1:184431800-184447600 Weak transcription Rectal Mucosa Donor 31 rectum
8 chr1:184433600-184449600 Weak transcription Sigmoid Colon Sigmoid Colon
9 chr1:184438000-184450600 Weak transcription Stomach Smooth Muscle stomach
10 chr1:184439200-184453600 Weak transcription Fetal Brain Female brain
11 chr1:184440600-184445800 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
12 chr1:184440800-184446200 Weak transcription Fetal Muscle Trunk muscle
13 chr1:184441000-184452000 Weak transcription Colonic Mucosa Colon
14 chr1:184441800-184447400 ZNF genes & repeats Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
15 chr1:184442000-184448400 ZNF genes & repeats Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
16 chr1:184442400-184446000 Weak transcription Fetal Intestine Large intestine
17 chr1:184442600-184446600 Weak transcription HUES48 Cell Line embryonic stem cell
18 chr1:184442600-184447400 Weak transcription Left Ventricle heart
19 chr1:184442800-184446400 Weak transcription HUES64 Cell Line embryonic stem cell
20 chr1:184442800-184446400 Weak transcription Breast Myoepithelial Primary Cells Breast
21 chr1:184442800-184447800 Weak transcription iPS-20b Cell Line embryonic stem cell
22 chr1:184442800-184449200 Weak transcription Placenta Placenta
23 chr1:184442800-184449600 Weak transcription H1 Cell Line embryonic stem cell
24 chr1:184443800-184446200 Weak transcription Duodenum Mucosa Duodenum
25 chr1:184444000-184446800 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
26 chr1:184444200-184446000 Weak transcription Lung lung
27 chr1:184444200-184446200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
28 chr1:184444200-184446200 Weak transcription Esophagus oesophagus
29 chr1:184444200-184449000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
30 chr1:184444200-184449800 Weak transcription Ovary ovary
31 chr1:184444200-184449800 Weak transcription Right Atrium heart
32 chr1:184444200-184450400 Weak transcription Pancreas Pancrea
33 chr1:184444200-184453400 Weak transcription Rectal Mucosa Donor 29 rectum
34 chr1:184444400-184446400 Weak transcription Primary hematopoietic stem cells blood
35 chr1:184444400-184446400 Weak transcription Skeletal Muscle Female skeletal muscle
36 chr1:184444400-184447800 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
37 chr1:184444400-184448000 Weak transcription iPS-15b Cell Line embryonic stem cell
38 chr1:184444400-184450400 Weak transcription NHDF-Ad bronchial
39 chr1:184444400-184452000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
40 chr1:184444600-184446200 Weak transcription Skeletal Muscle Male skeletal muscle
41 chr1:184444600-184446400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
42 chr1:184444600-184446600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
43 chr1:184444600-184447400 Weak transcription Fetal Intestine Small intestine
44 chr1:184444600-184449800 Weak transcription Adipose Nuclei Adipose
45 chr1:184444600-184452600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
46 chr1:184444600-184460400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
47 chr1:184444800-184447200 Weak transcription Cortex derived primary cultured neurospheres brain
48 chr1:184444800-184450000 Weak transcription Fetal Lung lung
49 chr1:184444800-184450400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
50 chr1:184444800-184451600 Weak transcription Rectal Smooth Muscle rectum

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015