The 2.0 version of rSNPBase

Variant report

Variant rs61825204
Chromosome Location chr1:184516284-184516285
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:45 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:184502400-184517000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr1:184502400-184520200 Weak transcription HUES64 Cell Line embryonic stem cell
3 chr1:184502600-184527200 Weak transcription Fetal Brain Female brain
4 chr1:184503200-184516400 Weak transcription Fetal Brain Male brain
5 chr1:184503400-184520400 Weak transcription iPS-15b Cell Line embryonic stem cell
6 chr1:184504200-184522600 Weak transcription Sigmoid Colon Sigmoid Colon
7 chr1:184505800-184518200 Weak transcription Gastric stomach
8 chr1:184505800-184524000 Weak transcription Skeletal Muscle Male skeletal muscle
9 chr1:184505800-184530800 Weak transcription Rectal Smooth Muscle rectum
10 chr1:184505800-184531600 Weak transcription Fetal Stomach stomach
11 chr1:184506200-184520600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
12 chr1:184508000-184516600 Weak transcription HUES48 Cell Line embryonic stem cell
13 chr1:184511400-184517200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
14 chr1:184511400-184530400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
15 chr1:184511800-184524600 Weak transcription Colon Smooth Muscle Colon
16 chr1:184512000-184520200 Weak transcription Primary hematopoietic stem cells blood
17 chr1:184512200-184524200 Weak transcription Skeletal Muscle Female skeletal muscle
18 chr1:184512200-184524400 Weak transcription Fetal Muscle Leg muscle
19 chr1:184512200-184530200 Weak transcription Rectal Mucosa Donor 31 rectum
20 chr1:184512200-184543600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
21 chr1:184512400-184530200 Weak transcription Stomach Smooth Muscle stomach
22 chr1:184513600-184516400 Enhancers HMEC breast
23 chr1:184513600-184517000 Enhancers Breast Myoepithelial Primary Cells Breast
24 chr1:184513800-184516400 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
25 chr1:184514400-184543800 Weak transcription H1 Cell Line embryonic stem cell
26 chr1:184515000-184517000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
27 chr1:184515000-184520600 Weak transcription Psoas Muscle Psoas
28 chr1:184515200-184517200 Enhancers NHEK skin
29 chr1:184515200-184520200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
30 chr1:184515200-184524000 Weak transcription Duodenum Smooth Muscle Duodenum
31 chr1:184515200-184531200 Weak transcription NHLF lung
32 chr1:184515400-184517000 Enhancers Placenta Amnion Placenta Amnion
33 chr1:184515600-184517400 Enhancers Right Atrium heart
34 chr1:184515800-184516400 Genic enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
35 chr1:184515800-184516400 Enhancers Adipose Nuclei Adipose
36 chr1:184515800-184517200 Enhancers Lung lung
37 chr1:184516000-184516400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
38 chr1:184516000-184516600 Enhancers Left Ventricle heart
39 chr1:184516000-184517400 Enhancers Right Ventricle heart
40 chr1:184516000-184517600 Enhancers Esophagus oesophagus
41 chr1:184516000-184524200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
42 chr1:184516200-184516400 Enhancers HUES6 Cell Line embryonic stem cell
43 chr1:184516200-184516800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
44 chr1:184516200-184517600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
45 chr1:184516200-184524400 Weak transcription Fetal Muscle Trunk muscle

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Last update: Aug 31, 2015