The 2.0 version of rSNPBase

Variant report

Variant rs61643431
Chromosome Location chr1:184533113-184533114
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:57 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:184512200-184543600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
2 chr1:184514400-184543800 Weak transcription H1 Cell Line embryonic stem cell
3 chr1:184520800-184542000 Weak transcription Ovary ovary
4 chr1:184521000-184535800 Weak transcription Primary hematopoietic stem cells blood
5 chr1:184521000-184547400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
6 chr1:184525000-184546000 Weak transcription Brain Angular Gyrus brain
7 chr1:184525200-184535200 Weak transcription Cortex derived primary cultured neurospheres brain
8 chr1:184525400-184535200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
9 chr1:184525600-184536000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr1:184525600-184544000 Weak transcription Brain Cingulate Gyrus brain
11 chr1:184525600-184545600 Weak transcription Fetal Muscle Trunk muscle
12 chr1:184525800-184535200 Weak transcription Primary hematopoietic stem cells short term culture blood
13 chr1:184526600-184535600 Weak transcription Left Ventricle heart
14 chr1:184528600-184535400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
15 chr1:184528600-184536400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
16 chr1:184529200-184535400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
17 chr1:184530600-184535200 Weak transcription Pancreas Pancrea
18 chr1:184530800-184533200 Enhancers Colon Smooth Muscle Colon
19 chr1:184531000-184536000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
20 chr1:184531000-184543800 Weak transcription Esophagus oesophagus
21 chr1:184531400-184533200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
22 chr1:184531400-184543200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
23 chr1:184531600-184536000 Weak transcription HMEC breast
24 chr1:184531800-184535600 Weak transcription Rectal Mucosa Donor 29 rectum
25 chr1:184531800-184535600 Weak transcription NHEK skin
26 chr1:184531800-184536600 Weak transcription Psoas Muscle Psoas
27 chr1:184531800-184537000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
28 chr1:184531800-184537000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
29 chr1:184531800-184537000 Weak transcription Right Atrium heart
30 chr1:184531800-184540600 Weak transcription Right Ventricle heart
31 chr1:184531800-184543800 Weak transcription Fetal Muscle Leg muscle
32 chr1:184532000-184535200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
33 chr1:184532200-184535200 Weak transcription Breast Myoepithelial Primary Cells Breast
34 chr1:184532200-184535400 Weak transcription Fetal Stomach stomach
35 chr1:184532200-184535600 Weak transcription Stomach Smooth Muscle stomach
36 chr1:184532200-184536400 Weak transcription Fetal Intestine Small intestine
37 chr1:184532200-184536600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
38 chr1:184532200-184536600 Weak transcription Sigmoid Colon Sigmoid Colon
39 chr1:184532200-184540600 Weak transcription Fetal Lung lung
40 chr1:184532400-184535200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
41 chr1:184532400-184535400 Weak transcription Rectal Mucosa Donor 31 rectum
42 chr1:184532400-184535400 Weak transcription NHDF-Ad bronchial
43 chr1:184532400-184536200 Weak transcription HSMMtube muscle
44 chr1:184532400-184536600 Weak transcription Duodenum Mucosa Duodenum
45 chr1:184532400-184536600 Weak transcription HSMM muscle
46 chr1:184532400-184545800 Weak transcription Rectal Smooth Muscle rectum
47 chr1:184532600-184535400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
48 chr1:184532600-184536400 Weak transcription Fetal Heart heart
49 chr1:184532600-184543600 Weak transcription Skeletal Muscle Male skeletal muscle
50 chr1:184532600-184545600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived

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Last update: Aug 31, 2015