The 2.0 version of rSNPBase

Variant report

Variant rs1969683
Chromosome Location chr1:184535613-184535614
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:58 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:184512200-184543600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
2 chr1:184514400-184543800 Weak transcription H1 Cell Line embryonic stem cell
3 chr1:184520800-184542000 Weak transcription Ovary ovary
4 chr1:184521000-184535800 Weak transcription Primary hematopoietic stem cells blood
5 chr1:184521000-184547400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
6 chr1:184525000-184546000 Weak transcription Brain Angular Gyrus brain
7 chr1:184525600-184536000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr1:184525600-184544000 Weak transcription Brain Cingulate Gyrus brain
9 chr1:184525600-184545600 Weak transcription Fetal Muscle Trunk muscle
10 chr1:184528600-184536400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
11 chr1:184531000-184536000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
12 chr1:184531000-184543800 Weak transcription Esophagus oesophagus
13 chr1:184531400-184543200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
14 chr1:184531600-184536000 Weak transcription HMEC breast
15 chr1:184531800-184536600 Weak transcription Psoas Muscle Psoas
16 chr1:184531800-184537000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
17 chr1:184531800-184537000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
18 chr1:184531800-184537000 Weak transcription Right Atrium heart
19 chr1:184531800-184540600 Weak transcription Right Ventricle heart
20 chr1:184531800-184543800 Weak transcription Fetal Muscle Leg muscle
21 chr1:184532200-184536400 Weak transcription Fetal Intestine Small intestine
22 chr1:184532200-184536600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
23 chr1:184532200-184536600 Weak transcription Sigmoid Colon Sigmoid Colon
24 chr1:184532200-184540600 Weak transcription Fetal Lung lung
25 chr1:184532400-184536200 Weak transcription HSMMtube muscle
26 chr1:184532400-184536600 Weak transcription Duodenum Mucosa Duodenum
27 chr1:184532400-184536600 Weak transcription HSMM muscle
28 chr1:184532400-184545800 Weak transcription Rectal Smooth Muscle rectum
29 chr1:184532600-184536400 Weak transcription Fetal Heart heart
30 chr1:184532600-184543600 Weak transcription Skeletal Muscle Male skeletal muscle
31 chr1:184532600-184545600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
32 chr1:184532800-184536200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
33 chr1:184532800-184536600 Weak transcription Skeletal Muscle Female skeletal muscle
34 chr1:184532800-184537800 Weak transcription Duodenum Smooth Muscle Duodenum
35 chr1:184533000-184537800 Weak transcription Fetal Adrenal Gland Adrenal Gland
36 chr1:184533000-184543800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
37 chr1:184533200-184547400 Weak transcription Colon Smooth Muscle Colon
38 chr1:184535200-184536000 Strong transcription Cortex derived primary cultured neurospheres brain
39 chr1:184535200-184536800 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
40 chr1:184535200-184536800 Genic enhancers Breast Myoepithelial Primary Cells Breast
41 chr1:184535200-184536800 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
42 chr1:184535200-184537800 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
43 chr1:184535200-184538400 Enhancers Primary hematopoietic stem cells short term culture blood
44 chr1:184535200-184538600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
45 chr1:184535400-184535800 Genic enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
46 chr1:184535400-184536000 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
47 chr1:184535400-184536000 Strong transcription Fetal Stomach stomach
48 chr1:184535400-184536200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
49 chr1:184535400-184536200 Strong transcription NHDF-Ad bronchial
50 chr1:184535400-184536600 Strong transcription Rectal Mucosa Donor 31 rectum

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015