The 2.0 version of rSNPBase

Variant report

Variant rs7552692
Chromosome Location chr1:113147897-113147898
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:113092000-113151200 Weak transcription Colonic Mucosa Colon
2 chr1:113109000-113160000 Weak transcription Gastric stomach
3 chr1:113109200-113152600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
4 chr1:113115400-113154200 Weak transcription Esophagus oesophagus
5 chr1:113115800-113160000 Weak transcription Small Intestine intestine
6 chr1:113116400-113160000 Weak transcription Spleen Spleen
7 chr1:113118000-113160800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
8 chr1:113118800-113160400 Weak transcription ES-I3 Cell Line embryonic stem cell
9 chr1:113121000-113148400 Weak transcription Stomach Mucosa stomach
10 chr1:113124600-113148400 Weak transcription NHLF lung
11 chr1:113128000-113148400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
12 chr1:113129600-113159000 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
13 chr1:113131400-113160000 Weak transcription Fetal Heart heart
14 chr1:113132600-113148400 Weak transcription Lung lung
15 chr1:113132600-113148400 Weak transcription Pancreas Pancrea
16 chr1:113132600-113148400 Weak transcription Thymus Thymus
17 chr1:113132600-113152400 Weak transcription Psoas Muscle Psoas
18 chr1:113132600-113154800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
19 chr1:113132600-113159800 Weak transcription Primary T killer naive cells fromperipheralblood blood
20 chr1:113133000-113148400 Weak transcription H1 Cell Line embryonic stem cell
21 chr1:113133000-113148400 Weak transcription H9 Cell Line embryonic stem cell
22 chr1:113133000-113148600 Weak transcription HSMMtube muscle
23 chr1:113133000-113152000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
24 chr1:113133000-113152400 Weak transcription Primary neutrophils fromperipheralblood blood
25 chr1:113133000-113160000 Weak transcription Fetal Brain Male brain
26 chr1:113133000-113160800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
27 chr1:113133200-113148400 Weak transcription Placenta Amnion Placenta Amnion
28 chr1:113133200-113148400 Weak transcription GM12878-XiMat blood
29 chr1:113133200-113148600 Weak transcription A549 lung
30 chr1:113133200-113149800 Weak transcription Primary B cells from peripheral blood blood
31 chr1:113133200-113150800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
32 chr1:113133200-113159600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
33 chr1:113133200-113159600 Weak transcription Primary T helper naive cells from peripheral blood blood
34 chr1:113133600-113148400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
35 chr1:113135400-113159800 Weak transcription Primary T killer memory cells from peripheral blood blood
36 chr1:113136200-113156800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
37 chr1:113136600-113158800 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
38 chr1:113136800-113159400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
39 chr1:113137000-113154200 Strong transcription Fetal Adrenal Gland Adrenal Gland
40 chr1:113137600-113160200 Weak transcription Pancreatic Islets Pancreatic Islet
41 chr1:113138000-113159400 Strong transcription Fetal Muscle Leg muscle
42 chr1:113139200-113159600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
43 chr1:113139600-113148600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
44 chr1:113140000-113148400 Weak transcription Primary T helper naive cells fromperipheralblood blood
45 chr1:113140000-113148400 Weak transcription Rectal Smooth Muscle rectum
46 chr1:113140000-113148800 Weak transcription Primary T regulatory cells fromperipheralblood blood
47 chr1:113140200-113148400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
48 chr1:113140200-113152600 Weak transcription Primary B cells from cord blood blood
49 chr1:113140200-113159200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
50 chr1:113140400-113160400 Weak transcription iPS-15b Cell Line embryonic stem cell

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Last update: Aug 31, 2015