Variant report

Variant rs4838960
Chromosome Location chr1:113163632-113163633
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:113159800-113164000 Active TSS iPS-20b Cell Line embryonic stem cell
2 chr1:113160000-113164400 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
3 chr1:113160000-113165400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
4 chr1:113160400-113163800 Active TSS H1 Cell Line embryonic stem cell
5 chr1:113160400-113163800 Active TSS Primary T cells fromperipheralblood blood
6 chr1:113160400-113163800 Active TSS HSMMtube muscle
7 chr1:113160400-113164000 Active TSS Psoas Muscle Psoas
8 chr1:113160400-113164000 Active TSS A549 lung
9 chr1:113160400-113164600 Active TSS K562 blood
10 chr1:113160600-113166000 Active TSS GM12878-XiMat blood
11 chr1:113160800-113163800 Active TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
12 chr1:113161000-113163800 Active TSS IMR90 fetal lung fibroblasts Cell Line lung
13 chr1:113161000-113163800 Active TSS Fetal Muscle Leg muscle
14 chr1:113161000-113164000 Active TSS NHLF lung
15 chr1:113161400-113164200 Transcr. at gene 5' and 3' Primary T helper 17 cells PMA-I stimulated --
16 chr1:113161800-113165400 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
17 chr1:113162000-113164200 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
18 chr1:113162200-113163800 Active TSS Primary Natural Killer cells fromperipheralblood blood
19 chr1:113162400-113163800 Flanking Active TSS Primary hematopoietic stem cells blood
20 chr1:113162600-113163800 Active TSS Right Atrium heart
21 chr1:113162600-113165000 Flanking Active TSS Primary neutrophils fromperipheralblood blood
22 chr1:113162600-113165600 Flanking Active TSS Primary T helper cells fromperipheralblood blood
23 chr1:113162800-113164800 Flanking Active TSS Primary B cells from peripheral blood blood
24 chr1:113162800-113165200 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
25 chr1:113162800-113165600 Flanking Active TSS Primary T cells from cord blood blood
26 chr1:113163000-113163800 Flanking Active TSS Primary T killer memory cells from peripheral blood blood
27 chr1:113163000-113163800 Flanking Active TSS Brain Cingulate Gyrus brain
28 chr1:113163000-113164000 Flanking Active TSS Liver Liver
29 chr1:113163000-113164000 Flanking Active TSS Duodenum Smooth Muscle Duodenum
30 chr1:113163000-113164000 Weak transcription Spleen Spleen
31 chr1:113163000-113164200 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
32 chr1:113163000-113164200 Flanking Active TSS Ganglion Eminence derived primary cultured neurospheres brain
33 chr1:113163000-113164400 Flanking Active TSS Primary B cells from cord blood blood
34 chr1:113163000-113165200 Flanking Active TSS Dnd41 blood
35 chr1:113163000-113165400 Flanking Active TSS Monocytes-CD14+_RO01746 blood
36 chr1:113163200-113163800 Flanking Active TSS ES-I3 Cell Line embryonic stem cell
37 chr1:113163200-113163800 Flanking Active TSS iPS-15b Cell Line embryonic stem cell
38 chr1:113163200-113163800 Flanking Active TSS iPS-18 Cell Line embryonic stem cell
39 chr1:113163200-113163800 Flanking Active TSS Primary T helper memory cells from peripheral blood 2 blood
40 chr1:113163200-113163800 Flanking Active TSS Primary T helper naive cells from peripheral blood blood
41 chr1:113163200-113163800 Flanking Active TSS Primary T helper naive cells fromperipheralblood blood
42 chr1:113163200-113163800 Flanking Active TSS Primary T helper memory cells from peripheral blood 1 blood
43 chr1:113163200-113163800 Flanking Active TSS Brain Angular Gyrus brain
44 chr1:113163200-113163800 Flanking Active TSS Brain Anterior Caudate brain
45 chr1:113163200-113163800 Flanking Active TSS Brain Hippocampus Middle brain
46 chr1:113163200-113163800 Flanking Active TSS Brain Dorsolateral Prefrontal Cortex brain
47 chr1:113163200-113163800 Flanking Active TSS Fetal Stomach stomach
48 chr1:113163200-113163800 Flanking Active TSS Rectal Mucosa Donor 31 rectum
49 chr1:113163200-113163800 Flanking Active TSS Rectal Smooth Muscle rectum
50 chr1:113163200-113163800 Flanking Active TSS NH-A brain

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