Variant report

Variant rs4839257
Chromosome Location chr1:113219388-113219389
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:92 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:113218200-113219400 Flanking Active TSS Primary T killer memory cells from peripheral blood blood
2 chr1:113218400-113219400 Enhancers Primary mononuclear cells fromperipheralblood Blood
3 chr1:113218400-113219800 Enhancers Primary B cells from peripheral blood blood
4 chr1:113218400-113221000 Enhancers Spleen Spleen
5 chr1:113218400-113230200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
6 chr1:113218400-113230400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
7 chr1:113218400-113234200 Weak transcription Aorta Aorta
8 chr1:113218600-113219400 Genic enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
9 chr1:113218600-113219400 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
10 chr1:113218600-113219400 Enhancers Adipose Nuclei Adipose
11 chr1:113218600-113219600 Enhancers Primary T cells fromperipheralblood blood
12 chr1:113218600-113219600 Enhancers Primary hematopoietic stem cells blood
13 chr1:113218600-113219600 Enhancers Primary T helper 17 cells PMA-I stimulated --
14 chr1:113218600-113219600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
15 chr1:113218600-113219600 Enhancers Rectal Mucosa Donor 31 rectum
16 chr1:113218600-113219600 Transcr. at gene 5' and 3' K562 blood
17 chr1:113218600-113220000 Enhancers Primary B cells from cord blood blood
18 chr1:113218600-113220200 Enhancers Primary T regulatory cells fromperipheralblood blood
19 chr1:113218600-113220200 Enhancers Thymus Thymus
20 chr1:113218600-113230200 Weak transcription Lung lung
21 chr1:113218600-113232200 Weak transcription Ovary ovary
22 chr1:113218600-113235000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
23 chr1:113218600-113235400 Weak transcription HSMM muscle
24 chr1:113218600-113240800 Weak transcription Right Atrium heart
25 chr1:113218800-113219400 Enhancers Cortex derived primary cultured neurospheres brain
26 chr1:113218800-113219400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
27 chr1:113218800-113219400 Enhancers Liver Liver
28 chr1:113218800-113219400 Enhancers Fetal Kidney kidney
29 chr1:113218800-113219400 Enhancers Rectal Mucosa Donor 29 rectum
30 chr1:113218800-113219600 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
31 chr1:113218800-113219600 Enhancers Primary hematopoietic stem cells short term culture blood
32 chr1:113218800-113219600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
33 chr1:113218800-113219600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
34 chr1:113218800-113219600 Enhancers Fetal Thymus thymus
35 chr1:113218800-113219600 Transcr. at gene 5' and 3' Dnd41 blood
36 chr1:113218800-113219800 Enhancers Breast Myoepithelial Primary Cells Breast
37 chr1:113218800-113219800 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
38 chr1:113218800-113220000 Enhancers Fetal Intestine Large intestine
39 chr1:113218800-113220400 Enhancers Fetal Intestine Small intestine
40 chr1:113218800-113220800 Enhancers Primary T killer naive cells fromperipheralblood blood
41 chr1:113218800-113220800 Weak transcription Brain Angular Gyrus brain
42 chr1:113218800-113221000 Enhancers Primary T helper cells fromperipheralblood blood
43 chr1:113218800-113221200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
44 chr1:113218800-113221200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
45 chr1:113218800-113221400 Enhancers Primary T helper memory cells from peripheral blood 1 blood
46 chr1:113218800-113222200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
47 chr1:113218800-113222800 Enhancers Fetal Adrenal Gland Adrenal Gland
48 chr1:113218800-113229200 Weak transcription Placenta Placenta
49 chr1:113218800-113230000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
50 chr1:113218800-113230000 Weak transcription Fetal Muscle Trunk muscle

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