Variant report

Variant	rs2932538
Chromosome Location	chr1:113216543-113216544
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:144)
CpG islands
(count:0)
Chromatin interactive
region (count:21)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:144 , 50 per page) page: 1 2 3

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	RAD21	chr1:113216263-113216547	A549	lung:	n/a	n/a
2	POLR2A	chr1:113215908-113217927	HL-60	blood:	n/a	n/a
3	POLR2A	chr1:113215591-113217660	SK-N-SH	brain:	n/a	n/a
4	BHLHE40	chr1:113216211-113216546	K562	blood:	n/a	n/a
5	SMC3	chr1:113216216-113218447	Hela-S3	cervix:	n/a	chr1:113216403-113216411
6	CTCF	chr1:113216400-113216550	HFF-Myc	foreskin:	n/a	n/a
7	SMC3	chr1:113216255-113216603	K562	blood:	n/a	chr1:113216403-113216411
8	KAP1	chr1:113216276-113217518	HEK293	kidney:	n/a	n/a
9	NFATC1	chr1:113215756-113217662	GM12878	blood:	n/a	n/a
10	CEBPB	chr1:113216478-113216913	K562	blood:	n/a	chr1:113216813-113216825
11	POLR2A	chr1:113214019-113219584	K562	blood:	n/a	n/a
12	BCLAF1	chr1:113215699-113217809	GM12878	blood:	n/a	n/a
13	POLR2A	chr1:113215898-113218174	GM12892	blood:	n/a	n/a
14	CTCF	chr1:113216420-113216570	MCF-7	breast:	n/a	n/a
15	CTCF	chr1:113216212-113216549	K562	blood:	n/a	n/a
16	POLR2A	chr1:113215444-113217912	U87	brain:	n/a	n/a
17	RUNX3	chr1:113216520-113217788	GM12878	blood:	n/a	n/a
18	POLR2A	chr1:113216124-113217725	HUVEC	blood vessel:	n/a	n/a
19	POLR2A	chr1:113214953-113217727	GM12891	blood:	n/a	n/a
20	MYC	chr1:113216256-113218203	K562	blood:	n/a	chr1:113217831-113217840
21	BCL3	chr1:113216267-113217587	K562	blood:	n/a	n/a
22	POLR2A	chr1:113215876-113218410	Hela-S3	cervix:	n/a	n/a
23	POLR2A	chr1:113215547-113218210	K562	blood:	n/a	n/a
24	POLR2A	chr1:113215875-113218128	GM12878	blood:	n/a	n/a
25	CEBPB	chr1:113216410-113216844	IMR90	lung:	n/a	chr1:113216813-113216825
26	TEAD4	chr1:113215431-113219568	K562	blood:	n/a	n/a
27	POLR2A	chr1:113216103-113218406	K562	blood:	n/a	n/a
28	POLR2A	chr1:113214734-113217689	GM12892	blood:	n/a	n/a
29	POLR2A	chr1:113215428-113217721	GM12892	blood:	n/a	n/a
30	RFX5	chr1:113216204-113218083	Hela-S3	cervix:	n/a	n/a
31	POLR2A	chr1:113215582-113218541	K562	blood:	n/a	n/a
32	POLR2A	chr1:113216352-113218165	MCF10A-Er-Src	breast:	n/a	n/a
33	NFIC	chr1:113216447-113217773	GM12878	blood:	n/a	chr1:113217221-113217238
34	POLR2A	chr1:113216078-113218089	IMR90	lung:	n/a	n/a
35	RCOR1	chr1:113216193-113218233	Hela-S3	cervix:	n/a	n/a
36	BCL3	chr1:113215815-113217662	A549	lung:	n/a	n/a
37	CTCF	chr1:113216150-113216635	MCF-7	breast:	n/a	n/a
38	TCF12	chr1:113216184-113217856	A549	lung:	n/a	chr1:113216293-113216301
39	PML	chr1:113215891-113217920	GM12878	blood:	n/a	n/a
40	POLR2A	chr1:113216427-113217566	PANC-1	pancreas:	n/a	n/a
41	POLR2A	chr1:113215930-113218288	K562	blood:	n/a	n/a
42	POLR2A	chr1:113215438-113217912	U87	brain:	n/a	n/a
43	CEBPB	chr1:113216242-113217540	Hela-S3	cervix:	n/a	chr1:113216813-113216825
44	CHD2	chr1:113216109-113218464	K562	blood:	n/a	n/a
45	POLR2A	chr1:113215459-113218377	GM12878	blood:	n/a	n/a
46	KAP1	chr1:113216207-113217461	U2OS	brain:	n/a	n/a
47	MAZ	chr1:113216271-113218178	Hela-S3	cervix:	n/a	chr1:113217831-113217840
48	SMC3	chr1:113216219-113216555	HepG2	liver:	n/a	chr1:113216403-113216411
49	CTCF	chr1:113216180-113216620	IMR90	lung:	n/a	n/a
50	ZNF143	chr1:113216256-113217689	Hela-S3	cervix:	n/a	n/a

No data

(count:21 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr1:113201703..113204472-chr1:113215980..113217663,2	MCF-7	breast:
2	chr1:113162051..113162904-chr1:113216304..113217427,3	MCF-7	breast:
3	chr1:113201056..113203899-chr1:113214909..113217826,3	MCF-7	breast:
4	chr1:113005689..113009641-chr1:113216362..113218803,3	MCF-7	breast:
5	chr1:113215712..113221627-chr1:113253708..113259381,5	MCF-7	breast:
6	chr1:113158395..113164969-chr1:113214433..113222934,24	MCF-7	breast:
7	chr1:113215800..113219074-chr1:113254460..113258669,6	MCF-7	breast:
8	chr1:113175098..113177937-chr1:113216084..113219096,3	K562	blood:
9	chr1:113166898..113170034-chr1:113215847..113218393,3	K562	blood:
10	chr1:113215224..113219998-chr1:113238829..113244717,20	MCF-7	breast:
11	chr1:113214782..113217536-chr1:113235013..113236894,2	K562	blood:
12	chr1:113166898..113170034-chr1:113215847..113218530,3	K562	blood:
13	chr1:113160799..113166409-chr1:113215716..113220433,9	K562	blood:
14	chr1:113216344..113217082-chr1:113249756..113250432,2	MCF-7	breast:
15	chr1:113160457..113163834-chr1:113216051..113218044,4	K562	blood:
16	chr1:113214002..113222947-chr1:113236890..113251579,47	MCF-7	breast:
17	chr1:113208980..113212025-chr1:113215390..113218147,4	MCF-7	breast:
18	chr1:113214590..113222957-chr1:113244863..113253590,39	MCF-7	breast:
19	chr1:113157097..113164348-chr1:113214570..113220795,12	MCF-7	breast:
20	chr1:113216176..113216798-chr1:113249665..113250317,2	NB4	blood:
21	chr1:113214866..113222565-chr1:113237012..113253952,54	K562	blood:

No data

Variant related genes	Relation type
MOV10	TF binding region
ENSG00000271810	Chromatin interaction
ENSG00000155367	Chromatin interaction
ENSG00000155363	Chromatin interaction
ENSG00000225075	Chromatin interaction
ENSG00000007341	Chromatin interaction
ENSG00000116489	Chromatin interaction
ENSG00000235299	Chromatin interaction
ENSG00000252750	Chromatin interaction
ENSG00000134245	Chromatin interaction
ENSG00000261595	Chromatin interaction
ENSG00000155366	Chromatin interaction

Extended variants
information (count: 86 )
Associated
traits (count: 13 )

rSNPs within LD-proxies of this variant (count:79)

rs_ID	r²[population]
rs10745331	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs10745332	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[AMR][1000 genomes];0.95[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs10857969	0.84[AFR][1000 genomes];0.86[AMR][1000 genomes];0.91[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11102508	0.86[ASN][1000 genomes]
rs11102510	0.83[EUR][1000 genomes]
rs11102517	0.80[EUR][1000 genomes]
rs12048528	1.00[ASW][hapmap];1.00[CEU][hapmap];0.93[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.97[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12118370	0.85[ASN][1000 genomes]
rs12119489	0.86[ASN][1000 genomes]
rs12125361	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12126494	0.88[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs12137107	0.81[AMR][1000 genomes];0.82[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs12138335	1.00[CEU][hapmap];0.82[EUR][1000 genomes]
rs12143068	0.82[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1238	1.00[ASW][hapmap];1.00[CEU][hapmap];0.93[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.97[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];0.93[YRI][hapmap];0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12401734	1.00[CEU][hapmap];0.91[GIH][hapmap];0.91[MEX][hapmap];0.92[TSI][hapmap]
rs12402469	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs12402929	1.00[CEU][hapmap]
rs12406906	1.00[CEU][hapmap];1.00[CHB][hapmap];0.96[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.81[MKK][hapmap];0.97[TSI][hapmap];0.86[ASN][1000 genomes]
rs12739994	1.00[CEU][hapmap];0.82[EUR][1000 genomes]
rs12750023	0.81[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs12750621	1.00[CEU][hapmap];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12758377	0.81[AMR][1000 genomes];0.82[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs17438324	0.84[ASN][1000 genomes]
rs2273369	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs2279500	0.91[GIH][hapmap]
rs2932529	1.00[CEU][hapmap];0.82[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs2932534	0.91[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.93[LWK][hapmap];1.00[MEX][hapmap];0.98[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];0.96[AMR][1000 genomes];0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2932535	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];0.96[AMR][1000 genomes];0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2932539	1.00[CEU][hapmap];0.93[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3013433	0.84[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs3013441	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];0.96[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.97[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];0.88[AMR][1000 genomes];0.95[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs34531155	0.82[EUR][1000 genomes]
rs35482634	0.84[ASN][1000 genomes]
rs3762335	0.84[ASN][1000 genomes]
rs3790611	1.00[CEU][hapmap];1.00[CHB][hapmap];0.96[CHD][hapmap];0.96[GIH][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];0.95[MKK][hapmap];0.92[TSI][hapmap];0.88[YRI][hapmap]
rs3790612	0.90[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];0.96[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.87[LWK][hapmap];0.91[MEX][hapmap];0.98[MKK][hapmap];0.92[TSI][hapmap];0.93[YRI][hapmap]
rs3795820	1.00[CEU][hapmap];0.95[GIH][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.86[EUR][1000 genomes]
rs4240534	0.82[AFR][1000 genomes];0.81[AMR][1000 genomes];0.84[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs4838960	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs4838961	0.81[AMR][1000 genomes];0.84[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs4839257	1.00[CEU][hapmap];0.93[CHB][hapmap];1.00[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];1.00[TSI][hapmap];0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs61818800	0.89[ASN][1000 genomes]
rs6537740	1.00[CEU][hapmap]
rs6537741	0.81[MEX][hapmap]
rs6537742	0.84[CEU][hapmap];0.81[MEX][hapmap]
rs6537744	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[ASN][1000 genomes]
rs6537745	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6537746	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];0.96[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.93[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.81[AMR][1000 genomes];0.86[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs6537747	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];1.00[TSI][hapmap];0.83[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs6658555	1.00[CEU][hapmap];0.91[GIH][hapmap];1.00[MEX][hapmap];0.97[TSI][hapmap]
rs6663922	0.82[ASN][1000 genomes]
rs6668533	1.00[CEU][hapmap];0.91[GIH][hapmap];0.91[MEX][hapmap];0.92[TSI][hapmap]
rs6671645	1.00[CEU][hapmap];1.00[CHB][hapmap];0.96[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];0.97[TSI][hapmap];0.86[ASN][1000 genomes]
rs6673930	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.84[ASN][1000 genomes]
rs6674053	0.81[AMR][1000 genomes];0.82[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6674068	0.81[AMR][1000 genomes];0.83[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6681371	1.00[CEU][hapmap];0.91[GIH][hapmap];1.00[MEX][hapmap];0.97[TSI][hapmap]
rs6682678	1.00[ASW][hapmap];0.85[CEU][hapmap];0.82[CHB][hapmap];1.00[CHD][hapmap];0.92[GIH][hapmap];0.93[JPT][hapmap];0.97[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6690169	0.86[ASN][1000 genomes]
rs6690292	1.00[CEU][hapmap];0.91[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs6691025	0.82[AFR][1000 genomes];0.81[AMR][1000 genomes];0.86[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs6691917	0.86[ASN][1000 genomes]
rs6693880	0.84[ASN][1000 genomes]
rs6696991	0.81[ASN][1000 genomes]
rs6698030	0.82[EUR][1000 genomes]
rs6701351	0.86[ASN][1000 genomes]
rs7415988	1.00[CEU][hapmap];0.84[EUR][1000 genomes]
rs7512984	0.87[AFR][1000 genomes];0.87[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs7516421	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs7522110	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap]
rs7527076	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[YRI][hapmap];0.81[AMR][1000 genomes];0.84[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7535636	0.89[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];0.96[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.95[MKK][hapmap];0.97[TSI][hapmap];0.93[YRI][hapmap];0.84[ASN][1000 genomes]
rs7542820	0.86[ASN][1000 genomes]
rs7546203	0.81[AMR][1000 genomes];0.84[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7551933	0.90[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];0.96[CHD][hapmap];0.96[GIH][hapmap];1.00[JPT][hapmap];0.90[LWK][hapmap];1.00[MEX][hapmap];0.98[MKK][hapmap];0.97[TSI][hapmap];0.93[YRI][hapmap]
rs9429694	0.81[AMR][1000 genomes];0.84[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs9662162	0.92[AMR][1000 genomes];0.89[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs999923	0.90[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];0.96[CHD][hapmap];0.96[GIH][hapmap];1.00[JPT][hapmap];0.90[LWK][hapmap];1.00[MEX][hapmap];0.98[MKK][hapmap];0.97[TSI][hapmap];0.93[YRI][hapmap];0.84[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:7 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv13370	chr1:112693290-113246263	Flanking Active TSS Weak transcription Enhancers Active TSS Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	87 gene(s)	inside rSNPs	diseases
2	nsv1002971	chr1:112924725-113740584	Weak transcription Enhancers Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Strong transcription Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	166 gene(s)	inside rSNPs	diseases
3	nsv535059	chr1:112924725-113740584	Enhancers Weak transcription Strong transcription Flanking Active TSS Bivalent/Poised TSS Active TSS Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	166 gene(s)	inside rSNPs	diseases
4	nsv1010276	chr1:113123932-113740584	Weak transcription Enhancers Strong transcription Active TSS Flanking Active TSS Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	158 gene(s)	inside rSNPs	diseases
5	nsv533295	chr1:113167645-113589588	Flanking Active TSS Active TSS Strong transcription Weak transcription Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	93 gene(s)	inside rSNPs	diseases
6	nsv1012119	chr1:113214869-113759081	Enhancers Weak transcription Genic enhancers Bivalent Enhancer Strong transcription Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	103 gene(s)	inside rSNPs	diseases
7	nsv535060	chr1:113214869-113759081	Enhancers Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Genic enhancers Active TSS Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	103 gene(s)	inside rSNPs	diseases

Variant related diseases (count:4)

Disease	PMID	Source
Systolic blood pressure	21909115	GWAS catalog
Hypertension	21909115	GWAS catalog
Diastolic blood pressure	21909115	GWAS catalog
Blood pressure	21909110	GWAS catalog

mRNA abundance (count:9)

SNP	Gene	Cis/trans	Tissue	Source
rs2932538	ST7L	cis	Lymphoblastoid	GTEx
rs2932538	ST7L	cis	lymphoblastoid	seeQTL
rs2932538	CAPZA1	Cis_1M	lymphoblastoid	RTeQTL
rs2932538	GSTM5	cis	parietal	SCAN
rs2932538	ALX3	cis	parietal	SCAN
rs2932538	HBXIP	cis	parietal	SCAN
rs2932538	CAPZA1	cis	lymphoblastoid	seeQTL
rs2932538	CTTNBP2NL	cis	parietal	SCAN
rs2932538	ST7L	cis	lung	GTEx

Chromatin state (count:127 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:113204200-113216600	Weak transcription	Esophagus	oesophagus
2	chr1:113204200-113216800	Weak transcription	Aorta	Aorta
3	chr1:113204800-113216600	Weak transcription	Small Intestine	intestine
4	chr1:113205000-113216600	Weak transcription	Right Ventricle	heart
5	chr1:113205400-113217000	Weak transcription	Gastric	stomach
6	chr1:113208800-113217000	Weak transcription	Spleen	Spleen
7	chr1:113210800-113216600	Weak transcription	Ovary	ovary
8	chr1:113211400-113216800	Weak transcription	Lung	lung
9	chr1:113212600-113216600	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
10	chr1:113212600-113216800	Weak transcription	Brain Germinal Matrix	brain
11	chr1:113212800-113216800	Weak transcription	Psoas Muscle	Psoas
12	chr1:113213800-113216600	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
13	chr1:113214000-113216800	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
14	chr1:113214400-113216600	Enhancers	H1 Cell Line	embryonic stem cell
15	chr1:113214400-113216600	Enhancers	H9 Cell Line	embryonic stem cell
16	chr1:113214600-113216800	Weak transcription	Thymus	Thymus
17	chr1:113214800-113216600	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
18	chr1:113214800-113216600	Weak transcription	Primary T cells fromperipheralblood	blood
19	chr1:113215000-113216600	Weak transcription	Fetal Muscle Trunk	muscle
20	chr1:113215200-113216600	Enhancers	Fetal Adrenal Gland	Adrenal Gland
21	chr1:113215200-113216800	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
22	chr1:113215400-113216600	Weak transcription	Primary hematopoietic stem cells short term culture	blood
23	chr1:113215400-113216600	Weak transcription	Placenta	Placenta
24	chr1:113215400-113216600	Enhancers	K562	blood
25	chr1:113215400-113216800	Weak transcription	Fetal Brain Female	brain
26	chr1:113215600-113216600	Enhancers	HUVEC	blood vessel
27	chr1:113215600-113216800	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
28	chr1:113215600-113216800	Enhancers	Primary monocytes fromperipheralblood	blood
29	chr1:113215800-113216600	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
30	chr1:113215800-113216600	Enhancers	Cortex derived primary cultured neurospheres	brain
31	chr1:113215800-113216600	Enhancers	Fetal Heart	heart
32	chr1:113215800-113216600	Enhancers	Fetal Intestine Small	intestine
33	chr1:113215800-113216600	Enhancers	Placenta Amnion	Placenta Amnion
34	chr1:113215800-113216600	Enhancers	Skeletal Muscle Female	skeletal muscle
35	chr1:113216000-113216600	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
36	chr1:113216000-113216600	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
37	chr1:113216000-113216600	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
38	chr1:113216000-113216600	Enhancers	Primary T helper cells fromperipheralblood	blood
39	chr1:113216000-113216600	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
40	chr1:113216000-113216600	Enhancers	Brain Hippocampus Middle	brain
41	chr1:113216000-113216600	Enhancers	Brain Inferior Temporal Lobe	brain
42	chr1:113216000-113216600	Enhancers	Colon Smooth Muscle	Colon
43	chr1:113216000-113216600	Enhancers	Fetal Intestine Large	intestine
44	chr1:113216000-113216800	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
45	chr1:113216000-113216800	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
46	chr1:113216000-113216800	Enhancers	Stomach Mucosa	stomach
47	chr1:113216000-113217000	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
48	chr1:113216000-113217200	Flanking Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
49	chr1:113216200-113216600	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
50	chr1:113216200-113216600	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell

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