Variant report

Variant	rs75549764
Chromosome Location	chr13:39934384-39934385
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 30 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:30 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2754118	chr13:39347702-40222644	Flanking Active TSS Enhancers Weak transcription ZNF genes & repeats Bivalent Enhancer Strong transcription Active TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	22 gene(s)	inside rSNPs	diseases
2	nsv1054600	chr13:39801283-40545027	Weak transcription Enhancers ZNF genes & repeats Active TSS Flanking Active TSS Strong transcription Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA	16 gene(s)	inside rSNPs	diseases
3	nsv1036674	chr13:39841482-40008117	Bivalent Enhancer Genic enhancers Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
4	esv996813	chr13:39929705-39937070	Enhancers Weak transcription ZNF genes & repeats Active TSS Strong transcription	lncRNA	n/a	inside rSNPs	diseases
5	esv3506174	chr13:39932452-39937350	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Strong transcription	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
6	esv3497338	chr13:39933102-39936550	Weak transcription ZNF genes & repeats Enhancers	n/a	n/a	inside rSNPs	diseases
7	esv3506185	chr13:39933377-39936825	ZNF genes & repeats Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
8	esv3497336	chr13:39933552-39936600	Enhancers Weak transcription ZNF genes & repeats	n/a	n/a	inside rSNPs	diseases
9	esv21149	chr13:39933627-39935387	Weak transcription	n/a	n/a	inside rSNPs	diseases
10	nsv826624	chr13:39933627-39935533	Weak transcription	n/a	n/a	inside rSNPs	diseases
11	esv3497337	chr13:39933688-39937250	Enhancers Weak transcription Flanking Active TSS Strong transcription ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases
12	esv3506207	chr13:39933778-39936097	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
13	nsv820008	chr13:39934001-39935574	Weak transcription	n/a	n/a	inside rSNPs	diseases
14	esv3506196	chr13:39934002-39936000	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
15	esv3506218	chr13:39934055-39935602	Weak transcription	n/a	n/a	inside rSNPs	diseases
16	esv3497335	chr13:39934071-39935581	Weak transcription	n/a	n/a	inside rSNPs	diseases
17	nsv561532	chr13:39934077-39935150	Weak transcription	n/a	n/a	inside rSNPs	diseases
18	nsv511518	chr13:39934077-39936903	Enhancers Weak transcription ZNF genes & repeats	n/a	n/a	inside rSNPs	diseases
19	nsv820588	chr13:39934091-39935533	Weak transcription	n/a	n/a	inside rSNPs	diseases
20	esv3497339	chr13:39934094-39935579	Weak transcription	n/a	n/a	inside rSNPs	diseases
21	esv3497340	chr13:39934094-39935579	Weak transcription	n/a	n/a	inside rSNPs	diseases
22	nsv512313	chr13:39934104-39935546	Weak transcription	n/a	n/a	inside rSNPs	diseases
23	esv3506229	chr13:39934105-39935637	Weak transcription	n/a	n/a	inside rSNPs	diseases
24	esv3522130	chr13:39934106-39935802	Weak transcription	n/a	n/a	inside rSNPs	diseases
25	esv3522141	chr13:39934106-39935802	Weak transcription	n/a	n/a	inside rSNPs	diseases
26	esv3506162	chr13:39934123-39935550	Weak transcription	n/a	n/a	inside rSNPs	diseases
27	esv988930	chr13:39934183-39935480	Weak transcription	n/a	n/a	inside rSNPs	diseases
28	esv3506240	chr13:39934183-39935487	Weak transcription	n/a	n/a	inside rSNPs	diseases
29	esv1412441	chr13:39934188-39935486	Weak transcription	n/a	n/a	inside rSNPs	diseases
30	nsv64628	chr13:39934219-39935515	Weak transcription	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:39925200-39936800	Weak transcription	Brain Cingulate Gyrus	brain
2	chr13:39925200-39938600	Weak transcription	Aorta	Aorta
3	chr13:39928400-39936400	Weak transcription	Left Ventricle	heart
4	chr13:39928400-39939000	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
5	chr13:39928400-39939000	Weak transcription	Right Atrium	heart
6	chr13:39928800-39938800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
7	chr13:39929200-39938800	Weak transcription	Fetal Heart	heart
8	chr13:39933600-39936400	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
9	chr13:39933800-39937000	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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