The 2.0 version of rSNPBase

Variant report

Variant rs7555773
Chromosome Location chr1:84965424-84965425
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:84946000-84965800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
2 chr1:84946000-84967000 Weak transcription ES-WA7 Cell Line embryonic stem cell
3 chr1:84946000-84969600 Weak transcription Esophagus oesophagus
4 chr1:84946000-84970400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
5 chr1:84946000-84970800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
6 chr1:84946800-84967400 Strong transcription Primary Natural Killer cells fromperipheralblood blood
7 chr1:84947000-84965800 Strong transcription HUES64 Cell Line embryonic stem cell
8 chr1:84947400-84969800 Weak transcription Aorta Aorta
9 chr1:84947800-84966000 Strong transcription Primary T regulatory cells fromperipheralblood blood
10 chr1:84947800-84967800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
11 chr1:84949600-84968400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
12 chr1:84951200-84971000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
13 chr1:84952400-84967400 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
14 chr1:84953800-84968400 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
15 chr1:84954000-84965800 Strong transcription Dnd41 blood
16 chr1:84954800-84965800 Strong transcription HUES48 Cell Line embryonic stem cell
17 chr1:84954800-84966400 Strong transcription Primary monocytes fromperipheralblood blood
18 chr1:84954800-84966800 Strong transcription Breast Myoepithelial Primary Cells Breast
19 chr1:84954800-84967000 Strong transcription Primary T cells fromperipheralblood blood
20 chr1:84954800-84967600 Strong transcription Primary hematopoietic stem cells blood
21 chr1:84954800-84969200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
22 chr1:84955000-84965600 Strong transcription iPS-18 Cell Line embryonic stem cell
23 chr1:84955000-84965800 Strong transcription HUES6 Cell Line embryonic stem cell
24 chr1:84955000-84965800 Strong transcription Primary mononuclear cells fromperipheralblood Blood
25 chr1:84955000-84966600 Strong transcription Fetal Intestine Large intestine
26 chr1:84955000-84966800 Strong transcription iPS-20b Cell Line embryonic stem cell
27 chr1:84955000-84967000 Strong transcription Rectal Mucosa Donor 29 rectum
28 chr1:84955000-84967200 Strong transcription Fetal Thymus thymus
29 chr1:84955000-84967200 Strong transcription HSMM muscle
30 chr1:84955000-84967400 Strong transcription Muscle Satellite Cultured Cells --
31 chr1:84955000-84967400 Strong transcription HUVEC blood vessel
32 chr1:84955000-84967400 Strong transcription NH-A brain
33 chr1:84955000-84967400 Strong transcription NHDF-Ad bronchial
34 chr1:84955000-84968400 Strong transcription Monocytes-CD14+_RO01746 blood
35 chr1:84955200-84966000 Strong transcription Rectal Mucosa Donor 31 rectum
36 chr1:84955200-84966200 Strong transcription Duodenum Mucosa Duodenum
37 chr1:84955200-84966400 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
38 chr1:84955200-84966400 Strong transcription Hela-S3 cervix
39 chr1:84955200-84966600 Strong transcription Fetal Lung lung
40 chr1:84955200-84966800 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
41 chr1:84955200-84967000 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
42 chr1:84955200-84967400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
43 chr1:84955200-84967400 Strong transcription Adipose Nuclei Adipose
44 chr1:84955200-84967400 Strong transcription Fetal Muscle Trunk muscle
45 chr1:84955200-84968000 Strong transcription Osteobl bone
46 chr1:84955200-84968200 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
47 chr1:84955200-84968800 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
48 chr1:84955200-84968800 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
49 chr1:84955800-84967400 Strong transcription HMEC breast
50 chr1:84956000-84969400 Weak transcription Pancreas Pancrea

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Last update: Aug 31, 2015