Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr2:168075921..168078881-chr2:168792672..168795086,2	K562	blood:

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs10497323	1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12611980	0.95[EUR][1000 genomes]
rs12612028	0.95[EUR][1000 genomes]
rs1564384	1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs16853244	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1842233	1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2204279	0.82[EUR][1000 genomes]
rs4610018	0.92[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs57543537	0.91[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs60477253	0.80[EUR][1000 genomes]
rs6432989	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6708386	1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs6746061	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73029721	0.84[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7419512	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7564986	0.84[AMR][1000 genomes];0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7569158	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7602065	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7602119	0.90[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7603500	0.83[EUR][1000 genomes]
rs7605309	0.80[EUR][1000 genomes]
rs9784125	0.83[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv583591	chr2:168037489-168132892	Enhancers Weak transcription Flanking Active TSS Strong transcription Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region miRNA target site	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:168049600-168078800	Weak transcription	Right Ventricle	heart
2	chr2:168056800-168114000	Weak transcription	Psoas Muscle	Psoas
3	chr2:168067400-168096000	Weak transcription	Left Ventricle	heart
4	chr2:168068600-168078600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
5	chr2:168068600-168079000	Weak transcription	Fetal Muscle Leg	muscle
6	chr2:168077200-168082000	Weak transcription	Skeletal Muscle Male	skeletal muscle
7	chr2:168077200-168084600	Weak transcription	Skeletal Muscle Female	skeletal muscle

Quick Search: