Variant report

Variant	rs7556875
Chromosome Location	chr2:125575440-125575441
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs10178614	1.00[CEU][hapmap];0.91[EUR][1000 genomes]
rs10189843	0.91[EUR][1000 genomes]
rs10192080	0.89[YRI][hapmap]
rs10206035	0.86[YRI][hapmap]
rs11901852	0.89[YRI][hapmap];0.93[AFR][1000 genomes];0.86[AMR][1000 genomes]
rs1482838	0.86[YRI][hapmap];0.81[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs1840200	0.85[YRI][hapmap]
rs314710	0.85[YRI][hapmap]
rs6750443	0.89[YRI][hapmap]
rs7557008	0.85[YRI][hapmap]
rs7597341	0.85[YRI][hapmap]
rs7602098	0.85[YRI][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv834360	chr2:125492685-125683200	Enhancers Weak transcription Bivalent Enhancer ZNF genes & repeats Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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