Variant report

Variant	rs7563737
Chromosome Location	chr2:190470323-190470324
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 7 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:6)

rs_ID	r²[population]
rs10931426	1.00[ASW][hapmap];0.94[CEU][hapmap];0.95[GIH][hapmap];0.84[MEX][hapmap];0.80[MKK][hapmap];0.95[TSI][hapmap];1.00[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs11683621	0.93[AFR][1000 genomes];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs11901113	0.83[EUR][1000 genomes]
rs1439816	0.87[CEU][hapmap]
rs6727543	0.93[CEU][hapmap];0.81[GIH][hapmap];0.86[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs7592158	1.00[AMR][1000 genomes];0.92[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv533029	chr2:189812229-190554339	Active TSS Enhancers Weak transcription Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	40 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:190464800-190470800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
2	chr2:190469600-190477600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
3	chr2:190470200-190470600	Weak transcription	K562	blood

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dbSNP/dbVar ID: rs12345 /nsv7879
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chromosomal regions: chr1:12345-34567

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