Variant report

Variant	rs7563864
Chromosome Location	chr2:73616797-73616798
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr2:73615311..73618219-chr2:73646836..73648927,2	K562	blood:

Extended variants
information (count: 22 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs11689978	1.00[EUR][1000 genomes]
rs11883989	1.00[YRI][hapmap];0.89[AFR][1000 genomes];0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11883997	1.00[YRI][hapmap];0.94[AFR][1000 genomes];0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11893899	1.00[EUR][1000 genomes]
rs17008963	1.00[EUR][1000 genomes]
rs28730851	1.00[EUR][1000 genomes]
rs34927702	1.00[EUR][1000 genomes]
rs35760114	1.00[EUR][1000 genomes]
rs58830031	1.00[EUR][1000 genomes]
rs59084267	1.00[EUR][1000 genomes]
rs59369402	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs60303012	1.00[EUR][1000 genomes]
rs61736516	1.00[EUR][1000 genomes]
rs6727745	1.00[EUR][1000 genomes]
rs6735006	1.00[EUR][1000 genomes]
rs6736726	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6753922	1.00[EUR][1000 genomes]
rs7571243	1.00[EUR][1000 genomes]
rs7573464	1.00[EUR][1000 genomes]
rs7597166	1.00[EUR][1000 genomes]
rs7600268	1.00[EUR][1000 genomes]
rs7602957	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]

No data

Chromatin state (count:28 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:73614000-73626200	Weak transcription	Lung	lung
2	chr2:73614200-73626200	Weak transcription	HSMM	muscle
3	chr2:73614400-73626200	Weak transcription	Rectal Smooth Muscle	rectum
4	chr2:73614400-73626400	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
5	chr2:73614400-73626400	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
6	chr2:73614600-73641600	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
7	chr2:73614800-73625200	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
8	chr2:73614800-73628600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
9	chr2:73615000-73619000	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
10	chr2:73615000-73621400	Weak transcription	Fetal Stomach	stomach
11	chr2:73615000-73626200	Weak transcription	Duodenum Mucosa	Duodenum
12	chr2:73615000-73626200	Weak transcription	Sigmoid Colon	Sigmoid Colon
13	chr2:73615000-73626400	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
14	chr2:73615000-73626400	Weak transcription	Stomach Smooth Muscle	stomach
15	chr2:73615000-73626600	Weak transcription	Ovary	ovary
16	chr2:73615000-73628400	Weak transcription	Hela-S3	cervix
17	chr2:73615000-73645400	Weak transcription	Skeletal Muscle Female	skeletal muscle
18	chr2:73615000-73646800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
19	chr2:73615200-73621600	Weak transcription	Fetal Lung	lung
20	chr2:73615200-73621800	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
21	chr2:73615200-73626000	Weak transcription	Primary T cells from cord blood	blood
22	chr2:73615200-73626200	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
23	chr2:73615200-73626200	Weak transcription	Brain Hippocampus Middle	brain
24	chr2:73615200-73626200	Weak transcription	Thymus	Thymus
25	chr2:73615200-73646400	Weak transcription	iPS-20b Cell Line	embryonic stem cell
26	chr2:73616000-73626200	Weak transcription	Primary T helper cells fromperipheralblood	blood
27	chr2:73616200-73625000	Weak transcription	Dnd41	blood
28	chr2:73616400-73626200	Weak transcription	HepG2	liver

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