Variant report

Variant	rs7583068
Chromosome Location	chr2:212634108-212634109
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 16 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs4132462	0.89[EUR][1000 genomes]
rs55758468	0.94[EUR][1000 genomes]
rs55769536	0.94[EUR][1000 genomes]
rs55890667	0.82[ASN][1000 genomes]
rs61079605	0.83[EUR][1000 genomes]
rs62183021	0.83[EUR][1000 genomes]
rs62183024	0.80[EUR][1000 genomes]
rs62183028	0.97[EUR][1000 genomes]
rs62183029	0.97[EUR][1000 genomes]
rs62183031	0.87[EUR][1000 genomes]
rs6435670	0.82[ASN][1000 genomes]
rs72948506	0.83[EUR][1000 genomes]
rs7422793	0.81[EUR][1000 genomes]
rs7600261	0.85[EUR][1000 genomes]
rs7601502	0.83[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv34128	chr2:212581485-212857122	Weak transcription Enhancers Active TSS Flanking Active TSS Strong transcription ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:212631800-212635800	Weak transcription	Brain Hippocampus Middle	brain
2	chr2:212633200-212638000	Weak transcription	Aorta	Aorta
3	chr2:212633600-212634200	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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