Variant report

Variant	rs7422793
Chromosome Location	chr2:212603778-212603779
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 26 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs10932401	0.82[JPT][hapmap]
rs12622176	0.85[CEU][hapmap];0.88[EUR][1000 genomes]
rs35444377	0.90[EUR][1000 genomes]
rs4130781	0.88[CEU][hapmap];0.88[EUR][1000 genomes]
rs4130782	0.88[CEU][hapmap];0.88[EUR][1000 genomes]
rs4132462	0.85[CEU][hapmap];0.82[EUR][1000 genomes]
rs55897719	0.90[EUR][1000 genomes]
rs56405287	0.82[EUR][1000 genomes]
rs61079605	0.85[EUR][1000 genomes]
rs62182986	0.83[EUR][1000 genomes]
rs62182989	0.88[EUR][1000 genomes]
rs62182991	0.88[EUR][1000 genomes]
rs62182999	0.90[EUR][1000 genomes]
rs62183021	0.86[EUR][1000 genomes]
rs62183023	0.82[EUR][1000 genomes]
rs62183024	0.83[EUR][1000 genomes]
rs62183031	0.80[EUR][1000 genomes]
rs6749448	0.88[CEU][hapmap];0.90[EUR][1000 genomes]
rs72946582	0.88[EUR][1000 genomes]
rs72948506	0.85[EUR][1000 genomes]
rs7556896	0.82[EUR][1000 genomes]
rs7583068	0.81[EUR][1000 genomes]
rs7588431	0.82[JPT][hapmap]
rs7600261	0.85[CEU][hapmap];0.88[EUR][1000 genomes]
rs7601502	0.84[CEU][hapmap];0.87[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv34128	chr2:212581485-212857122	Weak transcription Enhancers Active TSS Flanking Active TSS Strong transcription ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:212602400-212606200	Weak transcription	Fetal Heart	heart

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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