Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr2:234798124..234800456-chr2:234800797..234805353,4	K562	blood:

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs13003628	0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs169922	0.97[EUR][1000 genomes]
rs183331	0.96[CEU][hapmap];0.95[EUR][1000 genomes]
rs213542	1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];0.94[YRI][hapmap];0.89[AFR][1000 genomes];0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs213545	0.93[CEU][hapmap];0.91[EUR][1000 genomes]
rs2215172	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2302156	0.95[CHB][hapmap];1.00[JPT][hapmap];0.93[ASN][1000 genomes]
rs4663339	0.96[CEU][hapmap];0.95[EUR][1000 genomes]
rs501145	0.96[CHB][hapmap];1.00[JPT][hapmap];0.94[ASN][1000 genomes]
rs525359	0.96[CHB][hapmap];1.00[JPT][hapmap];0.93[ASN][1000 genomes]
rs556691	0.95[CHB][hapmap];1.00[JPT][hapmap];0.93[ASN][1000 genomes]
rs580045	0.95[CHB][hapmap];1.00[JPT][hapmap];0.94[ASN][1000 genomes]
rs619929	0.96[CHB][hapmap];0.95[JPT][hapmap];0.90[ASN][1000 genomes]
rs626110	0.96[CHB][hapmap];1.00[JPT][hapmap];0.92[ASN][1000 genomes]
rs637082	0.93[ASN][1000 genomes]
rs638071	0.91[ASN][1000 genomes]
rs6431643	0.96[CEU][hapmap];0.95[EUR][1000 genomes]
rs6431644	0.89[CEU][hapmap];0.95[EUR][1000 genomes]
rs650570	0.92[ASN][1000 genomes]
rs650700	0.93[ASN][1000 genomes]
rs654279	0.95[CHB][hapmap];1.00[JPT][hapmap];0.93[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1013712	chr2:234558457-235495825	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Strong transcription Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	41 gene(s)	inside rSNPs	diseases
2	nsv532476	chr2:234595695-235134381	Enhancers Active TSS Weak transcription Flanking Active TSS Bivalent Enhancer Strong transcription ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	37 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:234800800-234802200	Enhancers	HSMMtube	muscle
2	chr2:234801200-234801800	Enhancers	Fetal Adrenal Gland	Adrenal Gland
3	chr2:234801200-234802000	Enhancers	HSMM	muscle
4	chr2:234801600-234801800	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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