Variant report

Variant	rs7609580
Chromosome Location	chr3:134442909-134442910
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 12 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs11714557	0.90[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs11924192	0.90[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs12639399	0.89[EUR][1000 genomes]
rs1562483	0.90[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs1562487	0.86[EUR][1000 genomes]
rs16841959	0.93[AFR][1000 genomes];0.82[AMR][1000 genomes];0.91[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs2197714	0.89[EUR][1000 genomes]
rs67368005	0.85[ASN][1000 genomes]
rs6802542	0.89[AFR][1000 genomes];0.85[AMR][1000 genomes];0.91[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs73222791	0.89[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs73222793	0.90[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs73225024	0.84[EUR][1000 genomes]

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:134438200-134444200	Weak transcription	Psoas Muscle	Psoas
2	chr3:134441400-134445400	Enhancers	Skeletal Muscle Female	skeletal muscle
3	chr3:134442600-134443200	Enhancers	Fetal Muscle Leg	muscle
4	chr3:134442600-134443400	Weak transcription	Skeletal Muscle Male	skeletal muscle

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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