Variant report
Variant | rs761901 |
---|---|
Chromosome Location | chr20:16409217-16409218 |
allele | C/T |
Outlinks | Ensembl   UCSC |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr20:16384000-16432600 | Weak transcription | Primary T helper memory cells from peripheral blood 2 | blood |
2 | chr20:16387400-16411800 | Weak transcription | Colonic Mucosa | Colon |
3 | chr20:16391600-16410800 | Weak transcription | Thymus | Thymus |
4 | chr20:16391800-16409800 | Weak transcription | Brain Angular Gyrus | brain |
5 | chr20:16391800-16414600 | Weak transcription | Colon Smooth Muscle | Colon |
6 | chr20:16392200-16412800 | Weak transcription | Fetal Kidney | kidney |
7 | chr20:16392200-16453000 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
8 | chr20:16392400-16411600 | Weak transcription | Brain Substantia Nigra | brain |
9 | chr20:16395200-16411400 | Weak transcription | Primary T helper naive cells from peripheral blood | blood |
10 | chr20:16396000-16411400 | Weak transcription | Primary T regulatory cells fromperipheralblood | blood |
11 | chr20:16396200-16412800 | Weak transcription | NHDF-Ad | bronchial |
12 | chr20:16396400-16411000 | Weak transcription | Muscle Satellite Cultured Cells | -- |
13 | chr20:16397400-16412000 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
14 | chr20:16398200-16417000 | Weak transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
15 | chr20:16398200-16431000 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
16 | chr20:16400000-16440000 | Weak transcription | NHEK | skin |
17 | chr20:16400200-16414000 | Weak transcription | Fetal Brain Female | brain |
18 | chr20:16401000-16414200 | Weak transcription | Fetal Brain Male | brain |
19 | chr20:16401200-16417000 | Weak transcription | Brain Germinal Matrix | brain |
20 | chr20:16402600-16410200 | Strong transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
21 | chr20:16402600-16412200 | Weak transcription | Brain Cingulate Gyrus | brain |
22 | chr20:16402800-16412800 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
23 | chr20:16402800-16412800 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
24 | chr20:16402800-16413600 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
25 | chr20:16403000-16413000 | Weak transcription | iPS-20b Cell Line | embryonic stem cell |
26 | chr20:16403600-16410600 | Strong transcription | Rectal Mucosa Donor 31 | rectum |
27 | chr20:16404000-16410200 | Strong transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
28 | chr20:16404000-16410200 | Strong transcription | Duodenum Mucosa | Duodenum |
29 | chr20:16404000-16410800 | Strong transcription | Primary T helper cells fromperipheralblood | blood |
30 | chr20:16404000-16411000 | Strong transcription | Adipose Nuclei | Adipose |
31 | chr20:16404200-16409600 | Strong transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
32 | chr20:16404200-16410200 | Strong transcription | Fetal Intestine Large | intestine |
33 | chr20:16404200-16410200 | Strong transcription | Left Ventricle | heart |
34 | chr20:16404200-16410200 | Strong transcription | Ovary | ovary |
35 | chr20:16404200-16411200 | Strong transcription | Rectal Mucosa Donor 29 | rectum |
36 | chr20:16404200-16411400 | Strong transcription | Primary T cells from cord blood | blood |
37 | chr20:16404200-16419200 | Weak transcription | Fetal Heart | heart |
38 | chr20:16404400-16410000 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
39 | chr20:16404400-16410200 | Strong transcription | Esophagus | oesophagus |
40 | chr20:16404400-16410200 | Strong transcription | Monocytes-CD14+_RO01746 | blood |
41 | chr20:16404400-16410400 | Strong transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
42 | chr20:16404600-16410600 | Strong transcription | Stomach Smooth Muscle | stomach |
43 | chr20:16404600-16411200 | Strong transcription | Duodenum Smooth Muscle | Duodenum |
44 | chr20:16404600-16414000 | Weak transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
45 | chr20:16404800-16410400 | Weak transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
46 | chr20:16404800-16412800 | Weak transcription | Primary T cells effector/memory enriched fromperipheralblood | blood |
47 | chr20:16404800-16414200 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
48 | chr20:16404800-16419800 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
49 | chr20:16404800-16425000 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
50 | chr20:16405000-16410600 | Strong transcription | HepG2 | liver |