The 2.0 version of rSNPBase

Variant report

Variant rs7621853
Chromosome Location chr3:47492691-47492692
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:49 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:47476600-47514200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
2 chr3:47481400-47496000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
3 chr3:47481400-47500600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr3:47484000-47507800 Weak transcription Primary B cells from cord blood blood
5 chr3:47484000-47511200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
6 chr3:47484200-47511200 Weak transcription Primary B cells from peripheral blood blood
7 chr3:47484400-47497200 Weak transcription Primary T helper naive cells from peripheral blood blood
8 chr3:47484600-47494200 Weak transcription Primary T helper cells PMA-I stimulated --
9 chr3:47484600-47497400 Weak transcription Primary hematopoietic stem cells short term culture blood
10 chr3:47484600-47500600 Weak transcription Primary hematopoietic stem cells blood
11 chr3:47484600-47514000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
12 chr3:47484600-47514200 Weak transcription Primary T cells fromperipheralblood blood
13 chr3:47484600-47514200 Weak transcription Primary T helper naive cells fromperipheralblood blood
14 chr3:47484600-47514200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
15 chr3:47484600-47514800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
16 chr3:47484800-47504400 Weak transcription Primary T helper cells fromperipheralblood blood
17 chr3:47484800-47504600 Weak transcription Primary T cells from cord blood blood
18 chr3:47484800-47514800 Weak transcription Thymus Thymus
19 chr3:47485000-47514800 Weak transcription Primary T regulatory cells fromperipheralblood blood
20 chr3:47485200-47502600 Weak transcription K562 blood
21 chr3:47485400-47493000 Weak transcription Spleen Spleen
22 chr3:47485400-47494200 Weak transcription Ovary ovary
23 chr3:47485400-47503200 Weak transcription Gastric stomach
24 chr3:47485600-47493200 Weak transcription Esophagus oesophagus
25 chr3:47485600-47494000 Weak transcription Primary T killer naive cells fromperipheralblood blood
26 chr3:47485800-47493600 Weak transcription Fetal Heart heart
27 chr3:47486000-47494200 Weak transcription Left Ventricle heart
28 chr3:47486000-47497200 Weak transcription A549 lung
29 chr3:47486000-47497400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
30 chr3:47486000-47500200 Weak transcription Fetal Intestine Large intestine
31 chr3:47486000-47500400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
32 chr3:47486000-47504600 Weak transcription Rectal Smooth Muscle rectum
33 chr3:47486000-47516000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
34 chr3:47486000-47516000 Weak transcription Small Intestine intestine
35 chr3:47486000-47516000 Weak transcription HSMM muscle
36 chr3:47486200-47497200 Weak transcription Hela-S3 cervix
37 chr3:47486200-47502600 Weak transcription Rectal Mucosa Donor 31 rectum
38 chr3:47486200-47506000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
39 chr3:47486200-47516000 Weak transcription Rectal Mucosa Donor 29 rectum
40 chr3:47486600-47494400 Weak transcription HepG2 liver
41 chr3:47486600-47500600 Weak transcription Skeletal Muscle Male skeletal muscle
42 chr3:47487000-47502400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
43 chr3:47487400-47497600 Weak transcription Liver Liver
44 chr3:47489000-47494000 Weak transcription Sigmoid Colon Sigmoid Colon
45 chr3:47489200-47500400 Weak transcription Fetal Intestine Small intestine
46 chr3:47491000-47494400 Weak transcription Pancreas Pancrea
47 chr3:47491400-47493400 Weak transcription Fetal Adrenal Gland Adrenal Gland
48 chr3:47492200-47494800 Enhancers Psoas Muscle Psoas
49 chr3:47492600-47494200 Weak transcription Breast Myoepithelial Primary Cells Breast

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Last update: Aug 31, 2015