Variant report

Variant rs7372780
Chromosome Location chr3:47463285-47463286
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:47441000-47476800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
2 chr3:47448400-47466000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
3 chr3:47450400-47484800 Weak transcription ES-I3 Cell Line embryonic stem cell
4 chr3:47451400-47466400 Weak transcription Pancreatic Islets Pancreatic Islet
5 chr3:47454600-47466800 Weak transcription Psoas Muscle Psoas
6 chr3:47456000-47473000 Strong transcription Thymus Thymus
7 chr3:47459000-47464000 Genic enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
8 chr3:47459200-47465200 Weak transcription Placenta Amnion Placenta Amnion
9 chr3:47459600-47470000 Strong transcription H9 Cell Line embryonic stem cell
10 chr3:47460400-47470400 Strong transcription NHEK skin
11 chr3:47461000-47466600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
12 chr3:47461200-47465400 Genic enhancers Right Ventricle heart
13 chr3:47461800-47467000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
14 chr3:47461800-47478800 Genic enhancers Fetal Adrenal Gland Adrenal Gland
15 chr3:47462000-47464800 Genic enhancers Spleen Spleen
16 chr3:47462200-47463800 Genic enhancers Primary Natural Killer cells fromperipheralblood blood
17 chr3:47462200-47464800 Genic enhancers Fetal Muscle Trunk muscle
18 chr3:47462400-47463400 Enhancers Primary T helper memory cells from peripheral blood 1 blood
19 chr3:47462400-47463400 Genic enhancers Ganglion Eminence derived primary cultured neurospheres brain
20 chr3:47462400-47463400 Enhancers HSMMtube muscle
21 chr3:47462400-47463600 Enhancers Primary T helper memory cells from peripheral blood 2 blood
22 chr3:47462400-47463600 Genic enhancers Primary T helper 17 cells PMA-I stimulated --
23 chr3:47462400-47463600 Enhancers Primary T killer naive cells fromperipheralblood blood
24 chr3:47462400-47463600 Genic enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
25 chr3:47462400-47463600 Genic enhancers Brain Anterior Caudate brain
26 chr3:47462400-47463600 Enhancers Brain Substantia Nigra brain
27 chr3:47462400-47463800 Genic enhancers ES-UCSF4 Cell Line embryonic stem cell
28 chr3:47462400-47463800 Enhancers Primary B cells from peripheral blood blood
29 chr3:47462400-47463800 Enhancers Primary T killer memory cells from peripheral blood blood
30 chr3:47462400-47463800 Genic enhancers Fetal Muscle Leg muscle
31 chr3:47462400-47464000 Enhancers Brain Angular Gyrus brain
32 chr3:47462400-47464000 Genic enhancers NHLF lung
33 chr3:47462400-47464400 Genic enhancers Breast Myoepithelial Primary Cells Breast
34 chr3:47462400-47464600 Genic enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
35 chr3:47462400-47464600 Enhancers Fetal Heart heart
36 chr3:47462400-47464600 Genic enhancers Pancreas Pancrea
37 chr3:47462400-47464600 Genic enhancers Rectal Mucosa Donor 31 rectum
38 chr3:47462400-47464800 Genic enhancers Foreskin Fibroblast Primary Cells skin02 Skin
39 chr3:47462400-47464800 Genic enhancers Brain Dorsolateral Prefrontal Cortex brain
40 chr3:47462400-47465400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
41 chr3:47462400-47467400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
42 chr3:47462600-47463400 Enhancers Primary monocytes fromperipheralblood blood
43 chr3:47462600-47463400 Genic enhancers Fetal Thymus thymus
44 chr3:47462600-47463800 Enhancers Duodenum Smooth Muscle Duodenum
45 chr3:47462600-47463800 Genic enhancers Fetal Stomach stomach
46 chr3:47462600-47464200 Genic enhancers Brain Cingulate Gyrus brain
47 chr3:47462600-47464600 Enhancers Left Ventricle heart
48 chr3:47462600-47465600 Weak transcription H1 Cell Line embryonic stem cell
49 chr3:47462600-47465800 Weak transcription HUES64 Cell Line embryonic stem cell
50 chr3:47462600-47466800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell

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