Variant report

Variant rs7622992
Chromosome Location chr3:20196647-20196648
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:111 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:20141200-20222400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr3:20151000-20196800 Weak transcription Stomach Mucosa stomach
3 chr3:20159200-20201400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
4 chr3:20162800-20198200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
5 chr3:20164400-20204400 Weak transcription Small Intestine intestine
6 chr3:20164800-20211400 Weak transcription Placenta Amnion Placenta Amnion
7 chr3:20167800-20226000 Weak transcription Muscle Satellite Cultured Cells --
8 chr3:20168800-20200800 Weak transcription GM12878-XiMat blood
9 chr3:20169600-20198400 Weak transcription Aorta Aorta
10 chr3:20169600-20198400 Weak transcription Pancreas Pancrea
11 chr3:20169800-20201600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
12 chr3:20169800-20202000 Weak transcription Rectal Mucosa Donor 31 rectum
13 chr3:20175800-20196800 Strong transcription Primary T cells fromperipheralblood blood
14 chr3:20179400-20197600 Weak transcription Right Atrium heart
15 chr3:20181800-20200200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
16 chr3:20182600-20201400 Weak transcription Fetal Adrenal Gland Adrenal Gland
17 chr3:20182800-20198000 Weak transcription Ovary ovary
18 chr3:20183600-20201000 Weak transcription Fetal Muscle Trunk muscle
19 chr3:20183800-20196800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
20 chr3:20183800-20198000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
21 chr3:20183800-20198400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
22 chr3:20183800-20199600 Weak transcription H1 Cell Line embryonic stem cell
23 chr3:20183800-20199600 Weak transcription HUES48 Cell Line embryonic stem cell
24 chr3:20184000-20198000 Weak transcription iPS-20b Cell Line embryonic stem cell
25 chr3:20184400-20197800 Weak transcription Lung lung
26 chr3:20184400-20198000 Weak transcription Right Ventricle heart
27 chr3:20184400-20198400 Weak transcription Spleen Spleen
28 chr3:20184400-20198600 Weak transcription Brain Hippocampus Middle brain
29 chr3:20184400-20199000 Weak transcription Esophagus oesophagus
30 chr3:20184600-20220200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
31 chr3:20187400-20197600 Strong transcription Primary Natural Killer cells fromperipheralblood blood
32 chr3:20187400-20197600 Strong transcription Liver Liver
33 chr3:20187400-20201000 Strong transcription Monocytes-CD14+_RO01746 blood
34 chr3:20187600-20201200 Weak transcription Primary T helper naive cells from peripheral blood blood
35 chr3:20188000-20198600 Strong transcription Primary monocytes fromperipheralblood blood
36 chr3:20188400-20204800 Weak transcription Fetal Brain Female brain
37 chr3:20188400-20212400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
38 chr3:20189000-20196800 Strong transcription Primary hematopoietic stem cells blood
39 chr3:20189600-20200800 Weak transcription ES-I3 Cell Line embryonic stem cell
40 chr3:20189800-20201600 Weak transcription Primary T killer memory cells from peripheral blood blood
41 chr3:20190000-20199600 Weak transcription A549 lung
42 chr3:20190200-20198200 Weak transcription Brain Anterior Caudate brain
43 chr3:20190200-20198400 Weak transcription Brain Angular Gyrus brain
44 chr3:20190200-20198600 Weak transcription Fetal Stomach stomach
45 chr3:20190200-20201400 Weak transcription Primary T helper naive cells fromperipheralblood blood
46 chr3:20190200-20201800 Weak transcription Fetal Intestine Large intestine
47 chr3:20190400-20202400 Weak transcription Skeletal Muscle Male skeletal muscle
48 chr3:20190600-20220200 Weak transcription Fetal Muscle Leg muscle
49 chr3:20191000-20199400 Weak transcription Brain Substantia Nigra brain
50 chr3:20191200-20200800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin

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