Variant report

Variant	rs7625159
Chromosome Location	chr3:111769417-111769418
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs10934131	0.96[AFR][1000 genomes];0.84[AMR][1000 genomes];0.87[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs11927988	0.96[AFR][1000 genomes];0.82[AMR][1000 genomes];0.87[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs11928025	0.85[ASN][1000 genomes]
rs12489437	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4682081	0.95[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs62280175	0.82[EUR][1000 genomes]
rs7622025	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7630245	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs774768	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9829091	0.82[EUR][1000 genomes];0.89[ASN][1000 genomes]

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:111762400-111771000	Weak transcription	Gastric	stomach
2	chr3:111763200-111772800	Weak transcription	Thymus	Thymus
3	chr3:111763400-111769600	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
4	chr3:111768000-111771000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
5	chr3:111768000-111771200	Weak transcription	iPS-18 Cell Line	embryonic stem cell
6	chr3:111768000-111779800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
7	chr3:111768200-111770800	Weak transcription	iPS-20b Cell Line	embryonic stem cell
8	chr3:111768400-111771000	Weak transcription	HUES48 Cell Line	embryonic stem cell
9	chr3:111768400-111771200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
10	chr3:111768600-111770600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
11	chr3:111768600-111770800	Weak transcription	HUES6 Cell Line	embryonic stem cell
12	chr3:111768600-111771400	Weak transcription	iPS-15b Cell Line	embryonic stem cell
13	chr3:111768600-111772800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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