Variant report
Variant | rs763478 |
---|---|
Chromosome Location | chr14:80138267-80138268 |
allele | C/T |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
No data |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs17109649 | 0.86[CHD][hapmap];0.81[TSI][hapmap] |
rs221446 | 0.86[CHD][hapmap] |
rs221451 | 0.81[EUR][1000 genomes] |
rs221453 | 0.81[EUR][1000 genomes] |
rs221457 | 0.86[CHD][hapmap];0.86[TSI][hapmap] |
rs221459 | 0.86[CHD][hapmap] |
rs221465 | 0.83[CHD][hapmap] |
rs221481 | 0.86[CHD][hapmap] |
rs221486 | 0.86[CHD][hapmap] |
rs221488 | 0.90[CHD][hapmap] |
rs221489 | 0.86[CHD][hapmap] |
rs221491 | 0.86[CHD][hapmap];0.82[TSI][hapmap] |
rs221492 | 0.86[CHD][hapmap] |
rs221494 | 0.86[CHD][hapmap] |
rs221497 | 0.86[CHD][hapmap];0.82[TSI][hapmap] |
rs221498 | 0.86[CHD][hapmap] |
rs9323675 | 0.82[TSI][hapmap] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv1045241 | chr14:79885361-80734201 | Weak transcription Enhancers Active TSS Bivalent/Poised TSS Flanking Active TSS Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site | 9 gene(s) | inside rSNPs | diseases |
2 | nsv1039622 | chr14:79908702-80266601 | Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Bivalent Enhancer Genic enhancers Strong transcription Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNA | 3 gene(s) | inside rSNPs | diseases |
No data |