Variant report

Variant	rs7635675
Chromosome Location	chr3:69421541-69421542
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs56411124	0.92[AMR][1000 genomes];0.98[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1007730	chr3:69355932-69730587	Active TSS Enhancers Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer Strong transcription Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
2	esv2760780	chr3:69413876-69513947	Enhancers Weak transcription Strong transcription Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:33 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:69419400-69421600	Enhancers	Left Ventricle	heart
2	chr3:69419800-69421600	Enhancers	HMEC	breast
3	chr3:69419800-69421800	Enhancers	Thymus	Thymus
4	chr3:69419800-69423800	Weak transcription	Fetal Brain Female	brain
5	chr3:69420000-69422200	Enhancers	Brain Hippocampus Middle	brain
6	chr3:69420000-69427400	Weak transcription	Pancreas	Pancrea
7	chr3:69420400-69426600	Weak transcription	Primary neutrophils fromperipheralblood	blood
8	chr3:69420600-69424600	Enhancers	Dnd41	blood
9	chr3:69420600-69433600	Weak transcription	Primary hematopoietic stem cells short term culture	blood
10	chr3:69420800-69421600	Genic enhancers	NHEK	skin
11	chr3:69420800-69422200	Genic enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
12	chr3:69421000-69421600	Genic enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
13	chr3:69421000-69425400	Weak transcription	Muscle Satellite Cultured Cells	--
14	chr3:69421000-69433600	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
15	chr3:69421200-69423600	Weak transcription	Primary hematopoietic stem cells	blood
16	chr3:69421200-69428000	Weak transcription	HSMMtube	muscle
17	chr3:69421400-69421600	Weak transcription	Brain Inferior Temporal Lobe	brain
18	chr3:69421400-69421800	Weak transcription	Fetal Lung	lung
19	chr3:69421400-69423000	Weak transcription	Fetal Heart	heart
20	chr3:69421400-69424800	Weak transcription	Brain Substantia Nigra	brain
21	chr3:69421400-69425400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
22	chr3:69421400-69426000	Weak transcription	Brain Angular Gyrus	brain
23	chr3:69421400-69426000	Weak transcription	Fetal Thymus	thymus
24	chr3:69421400-69427400	Weak transcription	HSMM	muscle
25	chr3:69421400-69428800	Weak transcription	Brain Anterior Caudate	brain
26	chr3:69421400-69428800	Weak transcription	Brain Cingulate Gyrus	brain
27	chr3:69421400-69429000	Weak transcription	Spleen	Spleen
28	chr3:69421400-69429800	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
29	chr3:69421400-69430400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
30	chr3:69421400-69432600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
31	chr3:69421400-69433400	Weak transcription	Aorta	Aorta
32	chr3:69421400-69433800	Weak transcription	Lung	lung
33	chr3:69421400-69433800	Weak transcription	Right Atrium	heart

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