Variant report
| Variant | rs7637460 |
|---|---|
| Chromosome Location | chr3:68465347-68465348 |
| allele | A/C |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:8)
| rs_ID | r2[population] |
|---|---|
| rs17047670 | 0.95[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs17047675 | 0.95[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs17047679 | 0.95[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs28510934 | 1.00[AMR][1000 genomes] |
| rs6549123 | 1.00[YRI][hapmap];0.90[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs6775916 | 1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs6790243 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs9836361 | 1.00[AMR][1000 genomes] |
Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page:
1
| No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
|---|---|---|---|---|---|---|---|
| 1 | nsv834721 | chr3:68365963-68526394 | Weak transcription Enhancers ZNF genes & repeats Active TSS | Chromatin interactive region | n/a | inside rSNPs | diseases |
| 2 | nsv1006007 | chr3:68451209-68474361 | Enhancers Weak transcription | n/a | n/a | inside rSNPs | diseases |
| 3 | nsv1001320 | chr3:68451209-68475128 | Enhancers Weak transcription | n/a | n/a | inside rSNPs | diseases |
| No data |
Chromatin state (count:0 , 50 per page) page:
| No data |
