Variant report

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs10048949	0.82[CEU][hapmap]
rs13075102	1.00[CEU][hapmap];1.00[YRI][hapmap];0.85[AFR][1000 genomes];0.80[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs13078972	0.88[CEU][hapmap]
rs1447914	0.88[CEU][hapmap]
rs1947159	0.83[CEU][hapmap]
rs6766713	0.82[CEU][hapmap]
rs6769544	0.82[CEU][hapmap]
rs6780515	0.82[CEU][hapmap]
rs6783370	0.83[CEU][hapmap]
rs6785030	0.82[CEU][hapmap]
rs6785140	0.82[CEU][hapmap]
rs6793385	0.87[CEU][hapmap]
rs6795855	0.82[CEU][hapmap]
rs73097803	0.85[AFR][1000 genomes]
rs7627303	0.82[CEU][hapmap]
rs7644380	0.82[CEU][hapmap]
rs7646223	0.85[AFR][1000 genomes];0.82[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs7646851	1.00[CEU][hapmap];0.80[EUR][1000 genomes]
rs9754605	0.88[CEU][hapmap]
rs9834435	0.82[CEU][hapmap]
rs9849474	0.82[CEU][hapmap]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv534038	chr3:60781917-60993082	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
2	esv2757872	chr3:60781943-61019003	ZNF genes & repeats Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
3	esv2759152	chr3:60781943-61220809	Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS Strong transcription Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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