The 2.0 version of rSNPBase

Variant report

Variant rs7654012
Chromosome Location chr4:79730844-79730845
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:41 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:79700200-79732800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
2 chr4:79702000-79731200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
3 chr4:79705600-79731200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
4 chr4:79709200-79731200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
5 chr4:79714400-79748400 Weak transcription Aorta Aorta
6 chr4:79720800-79747800 Weak transcription Osteobl bone
7 chr4:79721200-79741400 Weak transcription Thymus Thymus
8 chr4:79721600-79747200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
9 chr4:79721800-79731400 Weak transcription HMEC breast
10 chr4:79722200-79731600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
11 chr4:79725800-79731400 Weak transcription Fetal Heart heart
12 chr4:79726600-79731000 Weak transcription H9 Cell Line embryonic stem cell
13 chr4:79726600-79747800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
14 chr4:79727800-79748200 Weak transcription NHEK skin
15 chr4:79728400-79731000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
16 chr4:79728400-79731200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
17 chr4:79728400-79747200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
18 chr4:79728600-79731400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
19 chr4:79728600-79733600 Weak transcription Primary B cells from cord blood blood
20 chr4:79728600-79737800 Weak transcription Cortex derived primary cultured neurospheres brain
21 chr4:79728600-79738200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
22 chr4:79728600-79747200 Weak transcription Primary monocytes fromperipheralblood blood
23 chr4:79728800-79735000 Weak transcription Monocytes-CD14+_RO01746 blood
24 chr4:79729000-79747200 Weak transcription Fetal Muscle Trunk muscle
25 chr4:79729200-79731200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
26 chr4:79729600-79731400 Weak transcription Fetal Intestine Small intestine
27 chr4:79729600-79734600 Weak transcription Primary hematopoietic stem cells short term culture blood
28 chr4:79729800-79735000 Weak transcription Primary hematopoietic stem cells blood
29 chr4:79730000-79733600 Enhancers Primary B cells from peripheral blood blood
30 chr4:79730200-79731200 Weak transcription HUES48 Cell Line embryonic stem cell
31 chr4:79730400-79731200 Enhancers GM12878-XiMat blood
32 chr4:79730400-79731800 Enhancers Left Ventricle heart
33 chr4:79730400-79732000 Weak transcription Fetal Lung lung
34 chr4:79730400-79741400 Weak transcription Primary T cells from cord blood blood
35 chr4:79730600-79731000 Enhancers K562 blood
36 chr4:79730600-79731400 Enhancers Duodenum Mucosa Duodenum
37 chr4:79730600-79731800 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
38 chr4:79730600-79732000 Enhancers Psoas Muscle Psoas
39 chr4:79730600-79732400 Enhancers HUES6 Cell Line embryonic stem cell
40 chr4:79730800-79731400 Weak transcription Sigmoid Colon Sigmoid Colon
41 chr4:79730800-79733800 Enhancers Fetal Intestine Large intestine

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Last update: Aug 31, 2015