Variant report

rSNPs within LD-proxies of this variant (count:31)

rs_ID	r²[population]
rs10489057	0.82[EUR][1000 genomes]
rs11722358	0.82[EUR][1000 genomes]
rs11735255	0.82[EUR][1000 genomes]
rs11735313	0.85[EUR][1000 genomes]
rs11736850	0.81[EUR][1000 genomes]
rs11945394	0.82[EUR][1000 genomes]
rs1472572	0.83[EUR][1000 genomes]
rs16893257	0.80[EUR][1000 genomes]
rs16893316	0.82[EUR][1000 genomes]
rs16893404	0.82[EUR][1000 genomes]
rs16893419	0.85[EUR][1000 genomes]
rs1860821	0.82[EUR][1000 genomes]
rs28566142	0.83[EUR][1000 genomes]
rs28650994	0.83[EUR][1000 genomes]
rs28659920	0.82[EUR][1000 genomes]
rs41447446	0.82[EUR][1000 genomes]
rs59486353	0.81[EUR][1000 genomes]
rs60788991	0.80[EUR][1000 genomes]
rs6449231	0.82[EUR][1000 genomes]
rs67922017	0.80[EUR][1000 genomes]
rs6815561	0.82[EUR][1000 genomes]
rs6830484	0.85[EUR][1000 genomes]
rs6830697	0.84[EUR][1000 genomes]
rs6846948	0.80[EUR][1000 genomes]
rs73127513	0.82[EUR][1000 genomes]
rs73127531	0.82[EUR][1000 genomes]
rs73127547	0.83[EUR][1000 genomes]
rs73798733	0.82[EUR][1000 genomes]
rs7660573	0.82[EUR][1000 genomes]
rs7673330	0.80[EUR][1000 genomes]
rs7687874	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1004821	chr4:16055996-16830629	Enhancers Flanking Active TSS Weak transcription Strong transcription Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	22 gene(s)	inside rSNPs	diseases
2	nsv537046	chr4:16055996-16830629	Enhancers Flanking Active TSS ZNF genes & repeats Strong transcription Weak transcription Genic enhancers Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	22 gene(s)	inside rSNPs	diseases
3	nsv1006449	chr4:16338191-16412544	Weak transcription Enhancers Active TSS ZNF genes & repeats Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
4	nsv428755	chr4:16366311-16528135	Weak transcription Enhancers Bivalent Enhancer ZNF genes & repeats Strong transcription Flanking Active TSS Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
5	nsv518102	chr4:16386449-16410294	Enhancers Weak transcription	TF binding region Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:16396800-16397600	Enhancers	Fetal Adrenal Gland	Adrenal Gland

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