Variant report

Variant rs7675987
Chromosome Location chr4:54011526-54011527
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:84 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:53987800-54016800 Weak transcription NHLF lung
2 chr4:53993800-54027800 Weak transcription Fetal Stomach stomach
3 chr4:53995200-54014800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
4 chr4:53995400-54017800 Weak transcription Brain Substantia Nigra brain
5 chr4:53997000-54017600 Weak transcription Gastric stomach
6 chr4:53997400-54020000 Weak transcription HSMM muscle
7 chr4:53998600-54014400 Weak transcription Brain Hippocampus Middle brain
8 chr4:53999000-54013200 Weak transcription Brain Angular Gyrus brain
9 chr4:53999000-54017200 Weak transcription Fetal Lung lung
10 chr4:53999000-54027800 Weak transcription NHDF-Ad bronchial
11 chr4:54001200-54017600 Weak transcription Spleen Spleen
12 chr4:54003400-54019000 Weak transcription GM12878-XiMat blood
13 chr4:54003600-54012800 Weak transcription Esophagus oesophagus
14 chr4:54004000-54017600 Weak transcription Skeletal Muscle Female skeletal muscle
15 chr4:54004200-54020800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
16 chr4:54004200-54052200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
17 chr4:54005400-54012400 Weak transcription HMEC breast
18 chr4:54005600-54023600 Weak transcription Primary T killer naive cells fromperipheralblood blood
19 chr4:54005800-54012800 Weak transcription Fetal Brain Female brain
20 chr4:54007000-54017600 Weak transcription Right Ventricle heart
21 chr4:54007200-54030600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
22 chr4:54008000-54011600 Strong transcription Primary B cells from cord blood blood
23 chr4:54008200-54017200 Weak transcription Rectal Mucosa Donor 31 rectum
24 chr4:54008200-54017600 Weak transcription Sigmoid Colon Sigmoid Colon
25 chr4:54008400-54013000 Weak transcription Thymus Thymus
26 chr4:54008600-54019000 Weak transcription Fetal Intestine Small intestine
27 chr4:54008800-54017400 Weak transcription Colon Smooth Muscle Colon
28 chr4:54009200-54017200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
29 chr4:54009400-54016400 Weak transcription Placenta Placenta
30 chr4:54009400-54017400 Weak transcription Rectal Mucosa Donor 29 rectum
31 chr4:54009600-54011600 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
32 chr4:54009600-54011600 Strong transcription Monocytes-CD14+_RO01746 blood
33 chr4:54009600-54017200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
34 chr4:54009600-54017600 Weak transcription Rectal Smooth Muscle rectum
35 chr4:54009600-54017600 Weak transcription Stomach Smooth Muscle stomach
36 chr4:54009600-54024000 Weak transcription Brain Inferior Temporal Lobe brain
37 chr4:54009800-54011600 Strong transcription Primary mononuclear cells fromperipheralblood Blood
38 chr4:54009800-54011800 Strong transcription Primary T cells fromperipheralblood blood
39 chr4:54009800-54011800 Strong transcription Primary Natural Killer cells fromperipheralblood blood
40 chr4:54009800-54011800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
41 chr4:54009800-54012400 Weak transcription Small Intestine intestine
42 chr4:54009800-54017800 Weak transcription Colonic Mucosa Colon
43 chr4:54010000-54011600 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
44 chr4:54010000-54012400 Weak transcription Fetal Thymus thymus
45 chr4:54010200-54011600 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
46 chr4:54010200-54011600 Strong transcription Primary B cells from peripheral blood blood
47 chr4:54010200-54011800 Strong transcription Primary monocytes fromperipheralblood blood
48 chr4:54010200-54011800 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
49 chr4:54010200-54011800 Strong transcription Osteobl bone
50 chr4:54010200-54034600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood

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