Variant report
| Variant | rs7676425 |
|---|---|
| Chromosome Location | chr4:47132877-47132878 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:10)
| rs_ID | r2[population] |
|---|---|
| rs10805152 | 0.83[YRI][hapmap] |
| rs10938473 | 0.87[YRI][hapmap] |
| rs10938474 | 0.87[YRI][hapmap] |
| rs1372492 | 0.85[YRI][hapmap] |
| rs1442092 | 1.00[YRI][hapmap] |
| rs2119780 | 1.00[YRI][hapmap] |
| rs2165612 | 1.00[YRI][hapmap] |
| rs6845165 | 0.82[YRI][hapmap] |
| rs7694035 | 0.82[YRI][hapmap] |
| rs9991346 | 0.82[YRI][hapmap] |
Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page:
1
| No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
|---|---|---|---|---|---|---|---|
| 1 | nsv537078 | chr4:47059778-47137372 | Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer | Chromatin interactive region | n/a | inside rSNPs | diseases |
| 2 | nsv829922 | chr4:47093785-47261181 | Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer | Chromatin interactive regionlncRNA | n/a | inside rSNPs | diseases |
| 3 | nsv879003 | chr4:47102993-47215939 | Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer | Chromatin interactive regionlncRNA | n/a | inside rSNPs | diseases |
| No data |
Chromatin state (count:0 , 50 per page) page:
| No data |
