Variant report

Variant	rs7676433
Chromosome Location	chr4:26646802-26646803
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 5 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs16878551	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7686188	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv522423	chr4:26625185-26706342	Weak transcription Strong transcription ZNF genes & repeats Enhancers Genic enhancers Active TSS Flanking Active TSS	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
2	nsv878768	chr4:26625185-26766687	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Enhancers Active TSS Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
3	nsv524115	chr4:26631178-26706342	Weak transcription Strong transcription Enhancers ZNF genes & repeats Genic enhancers Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:59 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:26606400-26656600	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
2	chr4:26609600-26649400	Weak transcription	Psoas Muscle	Psoas
3	chr4:26613800-26657200	Weak transcription	Sigmoid Colon	Sigmoid Colon
4	chr4:26616600-26662600	Weak transcription	Stomach Smooth Muscle	stomach
5	chr4:26618200-26657200	Weak transcription	Pancreas	Pancrea
6	chr4:26622400-26662400	Weak transcription	Right Ventricle	heart
7	chr4:26623000-26670400	Weak transcription	Gastric	stomach
8	chr4:26625600-26665600	Weak transcription	Skeletal Muscle Male	skeletal muscle
9	chr4:26629200-26680800	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
10	chr4:26629400-26656800	Weak transcription	Lung	lung
11	chr4:26633800-26657000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
12	chr4:26633800-26658600	Weak transcription	Pancreatic Islets	Pancreatic Islet
13	chr4:26634000-26657000	Weak transcription	Brain Hippocampus Middle	brain
14	chr4:26635000-26675200	Weak transcription	NHDF-Ad	bronchial
15	chr4:26637600-26649400	Weak transcription	Placenta	Placenta
16	chr4:26640000-26691400	Weak transcription	Colon Smooth Muscle	Colon
17	chr4:26640400-26651000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
18	chr4:26640800-26662800	Weak transcription	NH-A	brain
19	chr4:26641000-26661400	Weak transcription	HSMMtube	muscle
20	chr4:26641000-26662000	Weak transcription	Primary T helper cells fromperipheralblood	blood
21	chr4:26641000-26664000	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
22	chr4:26642000-26649000	Weak transcription	HUES64 Cell Line	embryonic stem cell
23	chr4:26642000-26662000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
24	chr4:26642400-26649600	Weak transcription	Dnd41	blood
25	chr4:26642400-26657000	Weak transcription	Fetal Lung	lung
26	chr4:26642400-26657200	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
27	chr4:26642400-26659800	Weak transcription	Fetal Brain Male	brain
28	chr4:26642400-26662600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
29	chr4:26642400-26663000	Weak transcription	Primary T helper cells PMA-I stimulated	--
30	chr4:26642400-26666600	Weak transcription	Left Ventricle	heart
31	chr4:26642400-26697400	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
32	chr4:26642600-26648600	Weak transcription	Brain Angular Gyrus	brain
33	chr4:26642600-26656800	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
34	chr4:26642600-26656800	Weak transcription	Breast Myoepithelial Primary Cells	Breast
35	chr4:26642600-26656800	Weak transcription	Fetal Muscle Trunk	muscle
36	chr4:26642600-26657000	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
37	chr4:26642600-26657000	Weak transcription	Ovary	ovary
38	chr4:26642600-26661200	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
39	chr4:26642600-26662000	Weak transcription	Osteobl	bone
40	chr4:26642600-26662200	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
41	chr4:26642600-26662800	Weak transcription	Fetal Kidney	kidney
42	chr4:26642800-26656600	Weak transcription	Fetal Intestine Large	intestine
43	chr4:26642800-26657000	Weak transcription	Aorta	Aorta
44	chr4:26642800-26657200	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
45	chr4:26642800-26658200	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
46	chr4:26642800-26680000	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
47	chr4:26642800-26680800	Weak transcription	Skeletal Muscle Female	skeletal muscle
48	chr4:26643000-26656600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
49	chr4:26643000-26656800	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
50	chr4:26643000-26657000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived

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