Variant report

Variant	rs7685474
Chromosome Location	chr4:103376965-103376966
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 1 )

rSNPs within LD-proxies of this variant (count:4)

rs_ID	r²[population]
rs10031415	1.00[CEU][hapmap];1.00[GIH][hapmap];0.91[MEX][hapmap];1.00[TSI][hapmap]
rs13129951	1.00[GIH][hapmap]
rs1585607	1.00[CEU][hapmap];1.00[GIH][hapmap];0.91[LWK][hapmap];1.00[MEX][hapmap];0.98[MKK][hapmap];1.00[TSI][hapmap];0.85[YRI][hapmap]
rs7655375	0.88[CEU][hapmap]

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs7685474	DDIT4L	cis	cerebellum	SCAN

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:103375800-103377000	Enhancers	Fetal Muscle Trunk	muscle
2	chr4:103375800-103377400	Enhancers	Fetal Muscle Leg	muscle
3	chr4:103376000-103377000	Enhancers	Fetal Lung	lung
4	chr4:103376000-103377000	Enhancers	Rectal Mucosa Donor 29	rectum
5	chr4:103376000-103377000	Enhancers	Sigmoid Colon	Sigmoid Colon
6	chr4:103376200-103377000	Enhancers	Colon Smooth Muscle	Colon
7	chr4:103376200-103377000	Enhancers	Duodenum Mucosa	Duodenum
8	chr4:103376200-103377000	Enhancers	Rectal Mucosa Donor 31	rectum
9	chr4:103376200-103377200	Enhancers	Colonic Mucosa	Colon

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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