The 2.0 version of rSNPBase

Variant report

Variant rs7687964
Chromosome Location chr4:77187626-77187627
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:30 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:77173600-77202000 Weak transcription Psoas Muscle Psoas
2 chr4:77173800-77191400 Weak transcription Brain Cingulate Gyrus brain
3 chr4:77173800-77196000 Weak transcription Adipose Nuclei Adipose
4 chr4:77173800-77215800 Weak transcription Brain Hippocampus Middle brain
5 chr4:77177800-77199200 Weak transcription Placenta Placenta
6 chr4:77178800-77201200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
7 chr4:77180000-77202000 Weak transcription Gastric stomach
8 chr4:77182000-77194600 Weak transcription Stomach Mucosa stomach
9 chr4:77182400-77193400 Weak transcription Pancreatic Islets Pancreatic Islet
10 chr4:77183200-77193000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
11 chr4:77185000-77188600 Strong transcription Brain Inferior Temporal Lobe brain
12 chr4:77185000-77189000 Weak transcription Right Ventricle heart
13 chr4:77185000-77192600 Weak transcription Left Ventricle heart
14 chr4:77185200-77188600 Strong transcription Skeletal Muscle Female skeletal muscle
15 chr4:77185400-77189000 Strong transcription Breast Myoepithelial Primary Cells Breast
16 chr4:77185600-77188000 Strong transcription Brain Angular Gyrus brain
17 chr4:77186000-77187800 Strong transcription Stomach Smooth Muscle stomach
18 chr4:77186000-77188200 Strong transcription Brain Dorsolateral Prefrontal Cortex brain
19 chr4:77186000-77188400 Enhancers HepG2 liver
20 chr4:77186400-77188600 Enhancers K562 blood
21 chr4:77186400-77204200 Weak transcription Aorta Aorta
22 chr4:77186600-77196200 Weak transcription Fetal Intestine Large intestine
23 chr4:77186600-77196800 Weak transcription Primary hematopoietic stem cells short term culture blood
24 chr4:77186600-77215000 Weak transcription Brain Anterior Caudate brain
25 chr4:77187000-77188400 Weak transcription Pancreas Pancrea
26 chr4:77187000-77191600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
27 chr4:77187000-77196000 Weak transcription Fetal Intestine Small intestine
28 chr4:77187200-77189200 Weak transcription Fetal Adrenal Gland Adrenal Gland
29 chr4:77187400-77187800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
30 chr4:77187600-77202000 Weak transcription Brain Substantia Nigra brain

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Last update: Aug 31, 2015