Variant report

Variant	rs7691479
Chromosome Location	chr4:119862186-119862187
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr4:119860379..119862289-chr4:119871978..119873923,2	MCF-7	breast:
2	chr4:119861194..119864004-chr4:119866188..119868711,2	K562	blood:

Extended variants
information (count: 6 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:4)

rs_ID	r²[population]
rs10518322	1.00[YRI][hapmap]
rs10518324	1.00[YRI][hapmap]
rs11098450	1.00[YRI][hapmap]
rs11736024	1.00[YRI][hapmap]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv916641	chr4:119780023-120777320	Strong transcription Weak transcription Enhancers Active TSS Flanking Active TSS Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	72 gene(s)	inside rSNPs	diseases
2	nsv948802	chr4:119844269-120208926	Enhancers Weak transcription Strong transcription Active TSS Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	54 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:29 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:119857400-119862200	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
2	chr4:119857400-119862200	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
3	chr4:119858000-119862200	Weak transcription	NHDF-Ad	bronchial
4	chr4:119858000-119862600	Weak transcription	Primary neutrophils fromperipheralblood	blood
5	chr4:119858800-119871600	Weak transcription	Psoas Muscle	Psoas
6	chr4:119860200-119864000	Enhancers	Skeletal Muscle Male	skeletal muscle
7	chr4:119860400-119863000	Weak transcription	HSMMtube	muscle
8	chr4:119860600-119862200	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
9	chr4:119860600-119862800	Weak transcription	iPS-20b Cell Line	embryonic stem cell
10	chr4:119860800-119862800	Weak transcription	HUES48 Cell Line	embryonic stem cell
11	chr4:119860800-119863600	Enhancers	Skeletal Muscle Female	skeletal muscle
12	chr4:119860800-119864400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
13	chr4:119860800-119868200	Weak transcription	Fetal Heart	heart
14	chr4:119861400-119863600	Flanking Active TSS	Stomach Smooth Muscle	stomach
15	chr4:119861600-119862200	Genic enhancers	Fetal Stomach	stomach
16	chr4:119861600-119863000	Enhancers	Duodenum Smooth Muscle	Duodenum
17	chr4:119861600-119865200	Enhancers	Breast Myoepithelial Primary Cells	Breast
18	chr4:119861800-119862200	Enhancers	Lung	lung
19	chr4:119861800-119862400	Enhancers	Colon Smooth Muscle	Colon
20	chr4:119861800-119863600	Enhancers	Right Ventricle	heart
21	chr4:119861800-119864000	Enhancers	Left Ventricle	heart
22	chr4:119861800-119864000	Enhancers	Ovary	ovary
23	chr4:119861800-119864000	Enhancers	Right Atrium	heart
24	chr4:119862000-119862200	Enhancers	Aorta	Aorta
25	chr4:119862000-119862400	Enhancers	Hela-S3	cervix
26	chr4:119862000-119862800	Enhancers	Rectal Smooth Muscle	rectum
27	chr4:119862000-119863000	Weak transcription	iPS-18 Cell Line	embryonic stem cell
28	chr4:119862000-119863000	Enhancers	Fetal Adrenal Gland	Adrenal Gland
29	chr4:119862000-119863200	Enhancers	Brain Anterior Caudate	brain

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