Variant report

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs13101345	0.85[EUR][1000 genomes]
rs13109709	0.83[EUR][1000 genomes]
rs13147917	0.86[AFR][1000 genomes];0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs1357249	0.86[EUR][1000 genomes]
rs1464499	0.82[AFR][1000 genomes];0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs1522220	0.82[EUR][1000 genomes]
rs1522222	0.85[EUR][1000 genomes]
rs1818785	0.82[EUR][1000 genomes]
rs1818786	0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2204100	0.86[EUR][1000 genomes]
rs2648027	0.85[EUR][1000 genomes]
rs2648028	0.86[EUR][1000 genomes]
rs2648049	0.84[EUR][1000 genomes]
rs2648070	0.86[EUR][1000 genomes]
rs2686310	0.86[EUR][1000 genomes]
rs2686312	0.85[EUR][1000 genomes]
rs2691807	0.82[EUR][1000 genomes]
rs3932349	0.83[EUR][1000 genomes]
rs4612008	0.83[EUR][1000 genomes]
rs7658722	0.85[EUR][1000 genomes]
rs7672970	0.85[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv879706	chr4:107477804-107546665	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:107485600-107487200	Enhancers	HUVEC	blood vessel
2	chr4:107485800-107488600	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
3	chr4:107486200-107487200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
4	chr4:107486600-107487200	Enhancers	HMEC	breast

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