Variant report

Variant	rs76955229
Chromosome Location	chr4:86564370-86564371
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 17 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:17 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv519588	chr4:85762385-86591202	Weak transcription Enhancers Strong transcription Active TSS Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	17 gene(s)	inside rSNPs	diseases
2	nsv461566	chr4:85988032-86725502	Weak transcription Enhancers Flanking Active TSS Strong transcription ZNF genes & repeats Active TSS Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	5 gene(s)	inside rSNPs	diseases
3	nsv594747	chr4:85988032-86725502	Enhancers Active TSS Weak transcription Flanking Active TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	5 gene(s)	inside rSNPs	diseases
4	nsv470048	chr4:85998783-86720838	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Genic enhancers Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	5 gene(s)	inside rSNPs	diseases
5	esv3450999	chr4:86485840-86773745	Enhancers Weak transcription Genic enhancers Active TSS Flanking Active TSS ZNF genes & repeats Strong transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region miRNA	2 gene(s)	inside rSNPs	diseases
6	nsv829999	chr4:86500257-86666019	Weak transcription Flanking Active TSS Enhancers ZNF genes & repeats Genic enhancers Strong transcription Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region miRNA	2 gene(s)	inside rSNPs	diseases
7	esv7427	chr4:86564133-86564941	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
8	esv3354297	chr4:86564239-86564817	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a
9	esv3525400	chr4:86564261-86564759	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a
10	esv3344504	chr4:86564277-86564795	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a
11	esv3525399	chr4:86564282-86564753	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a
12	esv3465606	chr4:86564288-86564783	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a
13	esv3525398	chr4:86564305-86564821	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a
14	esv3465603	chr4:86564314-86564738	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
15	esv3449268	chr4:86564328-86564767	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
16	esv3989	chr4:86564329-86564858	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
17	esv3465605	chr4:86564337-86564785	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:86551400-86575200	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
2	chr4:86551800-86569600	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
3	chr4:86559600-86576600	Weak transcription	Primary monocytes fromperipheralblood	blood
4	chr4:86559800-86580200	Weak transcription	Fetal Muscle Leg	muscle
5	chr4:86560000-86565000	Weak transcription	Ovary	ovary
6	chr4:86560000-86565400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
7	chr4:86561800-86582800	Weak transcription	K562	blood
8	chr4:86562400-86579000	Weak transcription	Right Ventricle	heart
9	chr4:86562800-86564400	Enhancers	GM12878-XiMat	blood
10	chr4:86563200-86570200	Weak transcription	Primary B cells from cord blood	blood
11	chr4:86563800-86564400	Enhancers	Breast Myoepithelial Primary Cells	Breast
12	chr4:86564000-86574400	Weak transcription	Primary B cells from peripheral blood	blood

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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