Variant report

Variant	rs7696992
Chromosome Location	chr4:111190260-111190261
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs12647492	0.92[AMR][1000 genomes];0.90[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2108406	0.87[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs244057	0.84[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs244059	0.84[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs2713947	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs2713948	0.90[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs2713951	0.89[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs4235401	0.90[AMR][1000 genomes];0.90[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs4698823	0.92[AMR][1000 genomes];0.90[EUR][1000 genomes];0.89[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv869392	chr4:110945459-111235071	Flanking Active TSS Weak transcription Strong transcription Active TSS Enhancers Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	22 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:111189800-111191800	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
2	chr4:111190000-111190800	Enhancers	Osteobl	bone

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dbSNP/dbVar ID: rs12345 /nsv7879
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