Variant report

Variant	rs7702895
Chromosome Location	chr5:74612893-74612894
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs10070119	0.87[EUR][1000 genomes]
rs10942734	0.83[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs11957260	1.00[AFR][1000 genomes];0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1423527	0.88[EUR][1000 genomes]
rs2112653	0.89[AFR][1000 genomes];0.87[AMR][1000 genomes]
rs2126736	0.82[EUR][1000 genomes]
rs2335418	0.96[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs2878417	0.81[ASN][1000 genomes]
rs4703667	0.91[ASN][1000 genomes]
rs4704200	0.85[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs4704202	0.87[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs6871667	0.82[EUR][1000 genomes]
rs6892023	1.00[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7722186	0.87[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1016610	chr5:74403611-74627654	Weak transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:74607800-74615800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr5:74612800-74614800	Enhancers	Primary neutrophils fromperipheralblood	blood

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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