Variant report

Variant	rs7706708
Chromosome Location	chr5:57432275-57432276
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:3)

rs_ID	r²[population]
rs7708251	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7712149	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7730415	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1033051	chr5:57380218-57471801	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:57426600-57432600	Enhancers	HSMMtube	muscle
2	chr5:57429000-57432600	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
3	chr5:57429000-57432600	Enhancers	NHLF	lung
4	chr5:57429000-57433400	Enhancers	Fetal Muscle Leg	muscle
5	chr5:57429200-57432600	Enhancers	Muscle Satellite Cultured Cells	--
6	chr5:57429200-57432600	Enhancers	HSMM	muscle
7	chr5:57429200-57432600	Enhancers	Osteobl	bone
8	chr5:57429400-57432600	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
9	chr5:57429400-57432600	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
10	chr5:57430400-57432600	Enhancers	NHDF-Ad	bronchial
11	chr5:57430600-57433400	Weak transcription	Brain Germinal Matrix	brain
12	chr5:57431400-57432400	Enhancers	NH-A	brain
13	chr5:57431400-57432600	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
14	chr5:57431600-57432400	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
15	chr5:57432200-57432800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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