Variant report

Variant	rs7721102
Chromosome Location	chr5:91134442-91134443
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 19 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs13361969	1.00[EUR][1000 genomes]
rs1346446	1.00[EUR][1000 genomes]
rs1427952	1.00[EUR][1000 genomes]
rs16870268	1.00[EUR][1000 genomes]
rs16870279	1.00[EUR][1000 genomes]
rs16870281	1.00[EUR][1000 genomes]
rs16870312	1.00[EUR][1000 genomes]
rs16870375	1.00[EUR][1000 genomes]
rs56229231	1.00[EUR][1000 genomes]
rs6873710	1.00[EUR][1000 genomes]
rs6882105	1.00[EUR][1000 genomes]
rs73129583	1.00[EUR][1000 genomes]
rs73773202	1.00[EUR][1000 genomes]
rs7712798	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv830395	chr5:90955521-91135272	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
2	nsv882370	chr5:90986181-91287437	Enhancers Bivalent Enhancer Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
3	nsv882372	chr5:91018052-91221647	Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
4	nsv1017504	chr5:91092920-91178854	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	n/a
5	nsv830396	chr5:91121355-91343236	Flanking Active TSS Weak transcription Enhancers Bivalent Enhancer Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:91130600-91134800	Weak transcription	Fetal Heart	heart
2	chr5:91134000-91137200	Enhancers	Fetal Brain Female	brain
3	chr5:91134000-91137600	Enhancers	Fetal Brain Male	brain
4	chr5:91134400-91135200	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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