Variant report

Variant	rs7722252
Chromosome Location	chr5:127324931-127324932
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr5:127232934..127234618-chr5:127322508..127324974,2	MCF-7	breast:

Extended variants
information (count: 5 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:5)

rs_ID	r²[population]
rs13166597	0.89[ASN][1000 genomes]
rs4836356	0.81[AFR][1000 genomes];0.91[AMR][1000 genomes];0.86[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs61388269	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6862145	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs763880	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:26 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:127290600-127332000	Weak transcription	Aorta	Aorta
2	chr5:127297600-127332000	Weak transcription	Primary B cells from cord blood	blood
3	chr5:127297800-127358400	Weak transcription	Primary hematopoietic stem cells	blood
4	chr5:127304000-127333400	Weak transcription	Primary T cells from cord blood	blood
5	chr5:127306600-127333200	Weak transcription	Psoas Muscle	Psoas
6	chr5:127318000-127328800	Weak transcription	Stomach Mucosa	stomach
7	chr5:127323800-127327800	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
8	chr5:127323800-127328000	Weak transcription	Esophagus	oesophagus
9	chr5:127323800-127338200	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
10	chr5:127324000-127331200	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
11	chr5:127324000-127333200	Weak transcription	Left Ventricle	heart
12	chr5:127324000-127333200	Weak transcription	Pancreas	Pancrea
13	chr5:127324000-127350400	Weak transcription	HSMMtube	muscle
14	chr5:127324200-127330800	Weak transcription	Colon Smooth Muscle	Colon
15	chr5:127324200-127332200	Weak transcription	Brain Hippocampus Middle	brain
16	chr5:127324200-127334800	Weak transcription	K562	blood
17	chr5:127324200-127342800	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
18	chr5:127324400-127327400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
19	chr5:127324400-127329200	Weak transcription	A549	lung
20	chr5:127324400-127329400	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
21	chr5:127324400-127334400	Weak transcription	Gastric	stomach
22	chr5:127324400-127337400	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
23	chr5:127324400-127337400	Weak transcription	HMEC	breast
24	chr5:127324400-127337600	Weak transcription	NHEK	skin
25	chr5:127324400-127354800	Weak transcription	Breast Myoepithelial Primary Cells	Breast
26	chr5:127324400-127358400	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin

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