Variant report

Variant	rs7726011
Chromosome Location	chr5:127321694-127321695
allele	A/G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr5:127316884..127318392-chr5:127319932..127322079,2	K562	blood:
2	chr5:127317709..127324099-chr5:127413383..127420612,8	MCF-7	breast:

Variant related genes	Relation type
ENSG00000245937	Chromatin interaction
ENSG00000064651	Chromatin interaction

Extended variants
information (count: 19 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs10050374	0.84[AMR][1000 genomes];0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10057561	1.00[ASN][1000 genomes]
rs10064559	0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10068883	0.97[AFR][1000 genomes];0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10213776	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13160751	0.81[EUR][1000 genomes]
rs17164458	0.82[AFR][1000 genomes]
rs2011576	0.81[EUR][1000 genomes]
rs4835937	0.81[AFR][1000 genomes]
rs4836344	1.00[ASN][1000 genomes]
rs4836346	0.81[EUR][1000 genomes]
rs4836348	0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6595796	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6871743	0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6889756	0.87[AFR][1000 genomes];0.94[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs758181	0.86[AFR][1000 genomes];0.91[AMR][1000 genomes];0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7706518	0.84[AMR][1000 genomes];0.83[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs7717741	0.82[EUR][1000 genomes]
rs9327463	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:26 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:127290600-127332000	Weak transcription	Aorta	Aorta
2	chr5:127295800-127322800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
3	chr5:127296200-127322600	Weak transcription	Colon Smooth Muscle	Colon
4	chr5:127297600-127332000	Weak transcription	Primary B cells from cord blood	blood
5	chr5:127297800-127323200	Weak transcription	Gastric	stomach
6	chr5:127297800-127323600	Weak transcription	HSMMtube	muscle
7	chr5:127297800-127358400	Weak transcription	Primary hematopoietic stem cells	blood
8	chr5:127302400-127323400	Weak transcription	Fetal Stomach	stomach
9	chr5:127302600-127322800	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
10	chr5:127304000-127333400	Weak transcription	Primary T cells from cord blood	blood
11	chr5:127306600-127333200	Weak transcription	Psoas Muscle	Psoas
12	chr5:127306800-127323200	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
13	chr5:127306800-127323200	Weak transcription	Left Ventricle	heart
14	chr5:127306800-127323200	Weak transcription	NHEK	skin
15	chr5:127312800-127323200	Weak transcription	NHLF	lung
16	chr5:127317000-127323600	Weak transcription	Pancreas	Pancrea
17	chr5:127317400-127322000	Weak transcription	A549	lung
18	chr5:127318000-127323000	Weak transcription	Fetal Heart	heart
19	chr5:127318000-127323400	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
20	chr5:127318000-127328800	Weak transcription	Stomach Mucosa	stomach
21	chr5:127318400-127323000	Weak transcription	NHDF-Ad	bronchial
22	chr5:127318600-127323600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
23	chr5:127319200-127323200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
24	chr5:127320800-127323600	Enhancers	Adipose Nuclei	Adipose
25	chr5:127321600-127321800	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
26	chr5:127321600-127322000	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung

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