Variant report

Variant	rs7728368
Chromosome Location	chr5:92782624-92782625
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 5 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:4)

rs_ID	r²[population]
rs4489043	1.00[EUR][1000 genomes]
rs6865340	0.87[AFR][1000 genomes]
rs73133241	0.87[AFR][1000 genomes]
rs73133259	0.87[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv830402	chr5:92703901-92847345	Enhancers Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Flanking Active TSS Bivalent Enhancer Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:92743600-92799200	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
2	chr5:92760200-92798000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
3	chr5:92767400-92797000	Weak transcription	Fetal Brain Male	brain
4	chr5:92770000-92797800	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
5	chr5:92775200-92787400	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
6	chr5:92777800-92792600	Weak transcription	Fetal Lung	lung
7	chr5:92778000-92797400	Weak transcription	Muscle Satellite Cultured Cells	--
8	chr5:92778400-92793400	Weak transcription	Fetal Stomach	stomach

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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