Variant report

Variant	rs7728880
Chromosome Location	chr5:60890045-60890046
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs10939909	1.00[AFR][1000 genomes];0.81[AMR][1000 genomes]
rs10939911	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs1472615	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs16892656	1.00[AFR][1000 genomes];0.81[AMR][1000 genomes]
rs16892657	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs1862564	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6871481	1.00[EUR][1000 genomes]
rs6878519	1.00[EUR][1000 genomes]
rs6890328	1.00[EUR][1000 genomes]
rs7713560	0.95[AFR][1000 genomes];0.81[AMR][1000 genomes]
rs7733845	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:60878400-60895400	Weak transcription	Aorta	Aorta
2	chr5:60887000-60895200	Weak transcription	Brain Hippocampus Middle	brain
3	chr5:60889400-60890400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
4	chr5:60890000-60890200	Weak transcription	Pancreas	Pancrea

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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