Variant report

Variant	rs7739007
Chromosome Location	chr6:132598642-132598643
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 16 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:16)

rs_ID	r²[population]
rs1079654	1.00[GIH][hapmap];1.00[JPT][hapmap];0.92[TSI][hapmap]
rs11760080	1.00[GIH][hapmap];1.00[JPT][hapmap];0.92[TSI][hapmap]
rs15017	1.00[JPT][hapmap]
rs1569526	1.00[JPT][hapmap]
rs1569527	1.00[JPT][hapmap]
rs17637552	0.87[AMR][1000 genomes];0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1883339	0.95[EUR][1000 genomes]
rs2092236	1.00[GIH][hapmap];1.00[JPT][hapmap];0.92[TSI][hapmap]
rs6569789	1.00[JPT][hapmap]
rs6903616	1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[TSI][hapmap]
rs6917708	1.00[MEX][hapmap]
rs760811	0.93[GIH][hapmap];1.00[JPT][hapmap];0.92[TSI][hapmap]
rs9483425	0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9483433	1.00[JPT][hapmap]
rs9493273	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9493275	1.00[JPT][hapmap]

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:132594200-132599200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr6:132596600-132600800	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
3	chr6:132596600-132600800	Weak transcription	Fetal Muscle Trunk	muscle
4	chr6:132596800-132600800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
5	chr6:132596800-132600800	Weak transcription	Fetal Muscle Leg	muscle
6	chr6:132597000-132600800	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
7	chr6:132597000-132600800	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
8	chr6:132597000-132600800	Weak transcription	Duodenum Mucosa	Duodenum
9	chr6:132597000-132600800	Weak transcription	Fetal Intestine Large	intestine
10	chr6:132597000-132600800	Weak transcription	Stomach Mucosa	stomach
11	chr6:132597400-132600800	Weak transcription	Fetal Intestine Small	intestine
12	chr6:132598600-132599000	Enhancers	Fetal Brain Female	brain
13	chr6:132598600-132599200	Enhancers	Fetal Brain Male	brain

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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